RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 POPDC2Q9HBU9 364 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 CRNNQ9UBG3 495 aaPredicted RBP17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 PSMG1O95456 288 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 DGKAP23743 735 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 EIF3MQ7L2H7 374 aaKnown RBP17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 S100ZQ8WXG8 99 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 SNTG2Q9NY99 539 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 NINJ2Q9NZG7 142 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 HOXB6P17509 224 aaKnown RBP17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 ITGB3BPQ13352 177 aaPredicted RBP17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 DPYSL3Q14195 570 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 LPCAT1Q8NF37 534 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 MYDGFQ969H8 173 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 ARL15Q9NXU5 204 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 ADAM28Q9UKQ2 775 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 MT-CO1P00395 513 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 PLK1P53350 603 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 GRIK4Q16099 956 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 MEA1Q16626 185 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 PJA1Q8NG27 643 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 OSMRQ99650 979 aa17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 FDXACB1Q9BRP7 624 aaPredicted RBP17.69■□□□□ 0.42
NOTCH3-201ENST00000263388 SIGLEC16A6NMB1 481 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 MIPP30301 263 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 PTSQ03393 145 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 PRAMEF18Q5VWM3 479 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 TMC7Q7Z402 723 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 HIST1H2ABP04908 130 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 YBX3P16989 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 ITGB6P18564 788 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 ACLYP53396 1101 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 HIST3H2AQ7L7L0 130 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 OTOP1Q7RTM1 612 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 HIST1H2ACQ93077 130 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 MNTQ99583 582 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 ITGA2P17301 1181 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 DNAJC14Q6Y2X3 702 aaPredicted RBP17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 TSPAN14Q8NG11 270 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 C3orf18Q9UK00 162 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 SNRPB2P08579 225 aaKnown RBP17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 HUNKP57058 714 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 SLC39A8Q9C0K1 460 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 SPATC1LQ9H0A9 340 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 DNAJC18Q9H819 358 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 ING4Q9UNL4 249 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 A0A0B4J269 797 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 CBX6O95503 412 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 OAZ1P54368 228 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 BCL2L1Q07817 233 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 SLC27A1Q6PCB7 646 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 TMEM86AQ8N2M4 240 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 CELF6Q96J87 481 aaKnown RBP17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 SLC38A2Q96QD8 506 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 CELF2O95319 508 aaKnown RBP17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 S100A1P23297 94 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 FAM210AQ96ND0 272 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 MRPL57Q9BQC6 102 aaKnown RBP17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 ACADLP28330 430 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 TTPAP49638 278 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 RARRES1P49788 294 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 PARP6Q2NL67 630 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 LYPLAL1Q5VWZ2 237 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 CKAP2Q8WWK9 683 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 SLC9A7Q96T83 725 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 RACGAP1Q9H0H5 632 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 KCNQ5Q9NR82 932 aa17.68■□□□□ 0.42
NOTCH3-201ENST00000263388 ADGRB2O60241 1585 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 A0A0A0MRY4 1105 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 ACAT1P24752 427 aaKnown RBP17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 TBX2Q13207 712 aaPredicted RBP17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 SPATA13Q96N96 652 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 CDH9Q9ULB4 789 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 SNCAIPQ9Y6H5 919 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 UBR1Q8IWV7 1749 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 RGSL1A5PLK6 1076 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 TRIM32Q13049 653 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 FAM220AQ7Z4H9 259 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 DEPDC4Q8N2C3 294 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 IL25Q9H293 177 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 UMODL1Q5DID0 1318 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 LOXHD1Q8IVV2 1947 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 SRRM3A6NNA2 597 aaPredicted RBP17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 ALG11Q2TAA5 492 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 HLA-DQA1Q5Y7H0 255 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 ESRP1Q6NXG1 681 aaKnown RBP17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 PSTKQ8IV42 348 aaKnown RBP17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 FUKQ8N0W3 1084 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 ZSCAN5CA6NGD5 496 aaPredicted RBP17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 USP17L7P0C7H9 530 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 GMFBP60983 142 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 ARMC12Q5T9G4 340 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 MAGEE2Q8TD90 523 aaPredicted RBP17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 RTFDC1Q9BY42 306 aaPredicted RBP17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 ABCC13Q9NSE7 274 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 FAAP100Q0VG06 881 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 ACER1Q8TDN7 264 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 CYP2C18P33260 490 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 GRIA3P42263 894 aa17.67■□□□□ 0.42
NOTCH3-201ENST00000263388 SMIM11AP58511 58 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms