RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ZFR2Q9UPR6 939 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 MAP1BP46821 2468 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 ALOX15BO15296 676 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 AGTP01019 485 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 GLUD2P49448 558 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 BST2Q10589 180 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 SHBQ15464 509 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 IFI16Q16666 785 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 C18orf21Q32NC0 220 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 ARHGAP29Q52LW3 1261 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 TFDP3Q5H9I0 405 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 TWF2Q6IBS0 349 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 KLHDC10Q6PID8 442 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 LRRC31Q6UY01 552 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 UNC5AQ6ZN44 842 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 POF1BQ8WVV4 589 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 ZNF653Q96CK0 615 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC7A6OSQ96CW6 309 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 C1orf74Q96LT6 269 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 C3orf30Q96M34 536 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 TRBV5-4A0A0C4DH59 114 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 M0QYV0 167 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 KCNK3O14649 394 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 CST8O60676 142 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 ZBED1O96006 694 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 ANXA13P27216 316 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 FOXA1P55317 472 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 CCDC40Q4G0X9 1142 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 FAM171A1Q5VUB5 890 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 TMEM109Q9BVC6 243 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 KIAA1586Q9HCI6 787 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 ELOVL2Q9NXB9 296 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 UVRAGQ9P2Y5 699 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 HRH3Q9Y5N1 445 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 F5H423 210 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 GDF9O60383 454 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 AHSGP02765 367 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 ADRA2AP08913 450 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 SP100P23497 879 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 GBP2P32456 591 aaPredicted RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 SNX16P57768 344 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 C9orf64Q5T6V5 341 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 CALR3Q96L12 384 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 MECRQ9BV79 373 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 TKTL2Q9H0I9 626 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 CNGB3Q9NQW8 809 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 SNX24Q9Y343 169 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 OAS3Q9Y6K5 1087 aaKnown RBP5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 SF3B1O75533 1304 aaKnown RBP eCLIP5.76□□□□□ -1.493e-6■■■■■ 38.2
TOPBP1-201ENST00000260810 FBN3Q75N90 2809 aa5.76□□□□□ -1.49
TOPBP1-201ENST00000260810 A0A1W2PRU2 124 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 APOC4-APOC2K7ER74 178 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 OR1I1O60431 355 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 APOC2P02655 101 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 KRT3P12035 628 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TCF3P15923 654 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 GCGRP47871 477 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 SUOXP51687 545 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 ITGA8P53708 1063 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 SEC24CP53992 1094 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 PHC1P78364 1004 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 PAK2Q13177 524 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 CCNG2Q16589 344 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 MPEG1Q2M385 716 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 FAM117BQ6P1L5 589 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 OR7D4Q8NG98 312 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 RAET1EQ8TD07 263 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 ASNSD1Q9NWL6 643 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TARSL2A2RTX5 802 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 GOLGA6L9A6NEM1 432 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 C5orf60A6NFR6 353 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 GOLGA6L10A6NI86 522 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 E9PAM4 449 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 ANKRD28O15084 1053 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC8A1P32418 973 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TAF6P49848 677 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC7A9P82251 487 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TRIM14Q14142 442 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TFDP1Q14186 410 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 SMAD1Q15797 465 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 CCDC137Q6PK04 289 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 KANSL1Q7Z3B3 1105 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 CCDC91Q7Z6B0 441 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TTC7BQ86TV6 843 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 FAM71DQ8N9W8 422 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 RNF139Q8WU17 664 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 AZI2Q9H6S1 392 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TMEM248Q9NWD8 314 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TLR6Q9Y2C9 796 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 PTGDR2Q9Y5Y4 395 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 A0A1W2PS29 197 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 C19orf67A6NJJ6 358 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 H2AFZP0C0S5 128 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 CPOXP36551 454 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 SMYD5Q6GMV2 418 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 OVOS1Q6IE37 1185 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 H2AFVQ71UI9 128 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 VN1R5Q7Z5H4 357 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 CMTR2Q8IYT2 770 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms