RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 PRPF4O43172 522 aaKnown RBP eCLIP5.38□□□□□ -1.55
TRA2B-201ENST00000259043 NDUFB8O95169 186 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 TGM2P21980 687 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 CCKARP32238 428 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 IL6STP40189 918 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-201ENST00000259043 CCT5P48643 541 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 FAM3BP58499 235 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-201ENST00000259043 RPL15P61313 204 aaKnown RBP5.38□□□□□ -1.55
TRA2B-201ENST00000259043 ICA1Q05084 483 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 POU5F1BQ06416 359 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 SMTNL2Q2TAL5 461 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 ODF3L2Q3SX64 289 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 PIK3CD-AS1Q5SR53 167 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 WDR93Q6P2C0 686 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 SYTL1Q8IYJ3 562 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 EME1Q96AY2 570 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 TMEM41AQ96HV5 264 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-201ENST00000259043 TP63Q9H3D4 680 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-201ENST00000259043 PRDM16Q9HAZ2 1276 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 MAGED2Q9UNF1 606 aaPredicted RBP5.38□□□□□ -1.55
TRA2B-201ENST00000259043 ZBTB1Q9Y2K1 713 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 SQORQ9Y6N5 450 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 ARFGEF1Q9Y6D6 1849 aa5.38□□□□□ -1.55
TRA2B-201ENST00000259043 TMEM272A0A1B0GTI8 110 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 CRYABP02511 175 aaKnown RBP5.37□□□□□ -1.55
TRA2B-201ENST00000259043 CYP3A4P08684 503 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 PEPDP12955 493 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 SCP2P22307 547 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 GRK6P43250 576 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 ALDH18A1P54886 795 aaKnown RBP5.37□□□□□ -1.55
TRA2B-201ENST00000259043 NANOS2P60321 138 aaKnown RBP5.37□□□□□ -1.55
TRA2B-201ENST00000259043 SHC2P98077 582 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 TLE3Q04726 772 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 BIRC3Q13489 604 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 RALBP1Q15311 655 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 INPP5JQ15735 1006 aaPredicted RBP5.37□□□□□ -1.55
TRA2B-201ENST00000259043 TRIM60Q495X7 471 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 NKAPQ8N5F7 415 aaKnown RBP5.37□□□□□ -1.55
TRA2B-201ENST00000259043 PAF1Q8N7H5 531 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 FAM47BQ8NA70 645 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 SRFBP1Q8NEF9 429 aaKnown RBP5.37□□□□□ -1.55
TRA2B-201ENST00000259043 MUL1Q969V5 352 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 SLC25A28Q96A46 364 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 LTV1Q96GA3 475 aaPredicted RBP5.37□□□□□ -1.55
TRA2B-201ENST00000259043 ABHD14AQ9BUJ0 271 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 TXNRD2Q9NNW7 524 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 WWOXQ9NZC7 414 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 LUZP4Q9P127 313 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 CDC23Q9UJX2 597 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 CENPJQ9HC77 1338 aaPredicted RBP5.37□□□□□ -1.55
TRA2B-201ENST00000259043 PXDNLA1KZ92 1463 aa5.37□□□□□ -1.55
TRA2B-201ENST00000259043 A0A087WV62 115 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 AQP12BA6NM10 295 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 A6NNC1 897 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 PRR23D1E9PI22 279 aaPredicted RBP5.36□□□□□ -1.55
TRA2B-201ENST00000259043 DNPH1O43598 174 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 ASNA1O43681 348 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 PIP5K1CO60331 668 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 PRR23D2P0DMB1 279 aaPredicted RBP5.36□□□□□ -1.55
TRA2B-201ENST00000259043 ALDH7A1P49419 539 aaKnown RBP5.36□□□□□ -1.55
TRA2B-201ENST00000259043 THBS3P49746 956 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 TAS2R50P59544 299 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 BLMHQ13867 455 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 STARD3Q14849 445 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 DLGAP5Q15398 846 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 MANEAQ5SRI9 462 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 ANKRD40Q6AI12 368 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 ISM2Q6H9L7 571 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 RINT1Q6NUQ1 792 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 RFX8Q6ZV50 586 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 RTL10Q7L3V2 364 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 DDIASQ8IXT1 998 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 OR1N1Q8NGS0 311 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 ADAMTS15Q8TE58 950 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 WDR60Q8WVS4 1066 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 KAT2AQ92830 837 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 ATP2A3Q93084 1043 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 EVI5LQ96CN4 794 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 NLRP4Q96MN2 994 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 PRPF18Q99633 342 aaKnown RBP5.36□□□□□ -1.55
TRA2B-201ENST00000259043 WDR83Q9BRX9 315 aaKnown RBP5.36□□□□□ -1.55
TRA2B-201ENST00000259043 MECRQ9BV79 373 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 SPAG4Q9NPE6 437 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 DECR2Q9NUI1 292 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 IPO11Q9UI26 975 aaKnown RBP5.36□□□□□ -1.55
TRA2B-201ENST00000259043 UTS2RQ9UKP6 389 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 TTC21AQ8NDW8 1320 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 CD163L1Q9NR16 1453 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 MEGF6O75095 1541 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 C4BP0C0L5 1744 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 RGPD2P0DJD1 1756 aa5.36□□□□□ -1.55
TRA2B-201ENST00000259043 ITGB4P16144 1822 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 CYP3A7-CYP3A51PA0A087WV96 503 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 FAM90A18PA6NE21 464 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 FAM90A16PA6NEW6 464 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 FAM90A9PA6NNJ1 464 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 FAM90A5PA8MXJ8 464 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 FFAR2O15552 330 aa5.35□□□□□ -1.55
TRA2B-201ENST00000259043 WDHD1O75717 1129 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms