RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.7□□□□□ -1.02
TMEM258-201ENST00000257262 TMEM74BQ9NUR3 256 aa8.7□□□□□ -1.02
TMEM258-201ENST00000257262 INTUQ9ULD6 942 aa8.7□□□□□ -1.02
TMEM258-201ENST00000257262 HPCAL4Q9UM19 191 aa8.7□□□□□ -1.02
TMEM258-201ENST00000257262 SCML1Q9UN30 329 aa8.7□□□□□ -1.02
TMEM258-201ENST00000257262 NCKAP1Q9Y2A7 1128 aa8.7□□□□□ -1.02
TMEM258-201ENST00000257262 FCF1Q9Y324 198 aaKnown RBP8.7□□□□□ -1.02
TMEM258-201ENST00000257262 PCDHGA5Q9Y5G8 931 aa8.7□□□□□ -1.02
TMEM258-201ENST00000257262 CFAP54Q96N23 3096 aa8.7□□□□□ -1.02
TMEM258-201ENST00000257262 RALGAPA1Q6GYQ0 2036 aa8.7□□□□□ -1.02
TMEM258-201ENST00000257262 CXorf51AA0A1B0GTR3 108 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 A0A1W2PP55 124 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 RCCD1A6NED2 376 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 SOWAHDA6NJG2 315 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 TMEM110-MUSTN1A8MSY1 372 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 RASA4BC9J798 803 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 RNF103O00237 685 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 ALOX15BO15296 676 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 RASA4O43374 803 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 BUB1O43683 1085 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 LRP3O75074 770 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 ZNF821O75541 412 aaPredicted RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 RNASEH2AO75792 299 aaKnown RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 ADH1BP00325 375 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 ZNF806P0C7X5 589 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 FECHP22830 423 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 AMPD1P23109 780 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 ITPKAP23677 461 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 MAOBP27338 520 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 CDC25BP30305 580 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 CYLC1P35663 651 aaPredicted RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 MPLP40238 635 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 ARL4AP40617 200 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 ARHGAP25P42331 645 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 PSMD8P48556 350 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 PAPOLAP51003 745 aaKnown RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 ZNF135P52742 658 aaPredicted RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 NDST2P52849 883 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 TAS2R40P59535 323 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 SERINC3Q13530 473 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 ELAVL3Q14576 367 aaKnown RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 TCEAL1Q15170 157 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 PARP15Q460N3 678 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 TTC31Q49AM3 519 aaPredicted RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 CARD16Q5EG05 197 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 LYSMD4Q5XG99 296 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 C22orf39Q6P5X5 142 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 USP30Q70CQ3 517 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 CYP2U1Q7Z449 544 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 POLNQ7Z5Q5 900 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 TMTC1Q8IUR5 882 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 HDDC3Q8N4P3 179 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 AADATQ8N5Z0 425 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 GPR161Q8N6U8 529 aaKnown RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 SPC24Q8NBT2 197 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 NETO2Q8NC67 525 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 OR2A12Q8NGT7 310 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 GANCQ8TET4 914 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 TEKT4Q8WW24 435 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 PIGKQ92643 395 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 HMCESQ96FZ2 354 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 CELF6Q96J87 481 aaKnown RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 OMDQ99983 421 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 CEP44Q9C0F1 390 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 SLC39A8Q9C0K1 460 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 BTBD1Q9H0C5 482 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 NEUROG2Q9H2A3 272 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 PABPC3Q9H361 631 aaKnown RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 SMOC1Q9H4F8 434 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 PCDH18Q9HCL0 1135 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 VPS45Q9NRW7 570 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 FBXL12Q9NXK8 326 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 IMPACTQ9P2X3 320 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 SERGEFQ9UGK8 458 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 LCMT1Q9UIC8 334 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 SARDHQ9UL12 918 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 PPM1HQ9ULR3 514 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 TFR2Q9UP52 801 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 PCDHA13Q9Y5I0 950 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 EPN1Q9Y6I3 576 aaPredicted RBP8.69□□□□□ -1.02
TMEM258-201ENST00000257262 NUP205Q92621 2012 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 WDR87Q6ZQQ6 2873 aa8.69□□□□□ -1.02
TMEM258-201ENST00000257262 ABCA7Q8IZY2 2146 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 METTL12A8MUP2 240 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 PATE3B3GLJ2 98 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 H3BRJ5 948 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 J3KR12 359 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 PLK4O00444 970 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 MTA2O94776 668 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 NDUFA10O95299 355 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 CTSLP07711 333 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 CD48P09326 243 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 C5AR1P21730 350 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 IL4RP24394 825 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 CHRNA3P32297 505 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 DRD3P35462 400 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 GJC1P36383 396 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 DNA2P51530 1060 aa8.68□□□□□ -1.02
TMEM258-201ENST00000257262 METAP1P53582 386 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms