RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 TRIM8Q9BZR9 551 aa13.72□□□□□ -0.21
VHL-201ENST00000256474 ACOT9Q9Y305 439 aa13.72□□□□□ -0.21
VHL-201ENST00000256474 VCANP13611 3396 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 HDAC3O15379 428 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 AP2A1O95782 977 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 HMBSP08397 361 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 CD68P34810 354 aaPredicted RBP13.71□□□□□ -0.21
VHL-201ENST00000256474 CDH13P55290 713 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 FAM187BQ17R55 369 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 AGKQ53H12 422 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 ARHGAP17Q68EM7 881 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 LRRC8EQ6NSJ5 796 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 FASTKD5Q7L8L6 764 aaKnown RBP13.71□□□□□ -0.21
VHL-201ENST00000256474 ZBTB46Q86UZ6 589 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 GALNT15Q8N3T1 639 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 ACTRT2Q8TDY3 377 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 PCED1BQ96HM7 432 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 MPP4Q96JB8 637 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 SLC45A3Q96JT2 553 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 HSFY1Q96LI6 401 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 POMKQ9H5K3 350 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 TRPC7Q9HCX4 862 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 IPPQ9Y573 584 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 SNX13Q9Y5W8 968 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 DNAJC25-GNG10A0A024R161 153 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 G3V2L1 256 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 AHSGP02765 367 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 PIRTP0C851 137 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 CRABP2P29373 138 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 COG7P83436 770 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 PQLC1Q8N2U9 271 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 LRRC52Q8N7C0 313 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 DNAI2Q9GZS0 605 aa13.71□□□□□ -0.21
VHL-201ENST00000256474 HTTP42858 3142 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 ZCWPW2A0A1B0GU75 182 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 XPOTO43592 962 aaKnown RBP13.71□□□□□ -0.22
VHL-201ENST00000256474 TIMM44O43615 452 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 B3GAT3O94766 335 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 SNAI1O95863 264 aaPredicted RBP13.71□□□□□ -0.22
VHL-201ENST00000256474 CDK7P50613 346 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 MS4A2Q01362 244 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 PTK2BQ14289 1009 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 KYAT1Q16773 422 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 RARS2Q5T160 578 aaKnown RBP13.71□□□□□ -0.22
VHL-201ENST00000256474 KIAA0319Q5VV43 1072 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 CLEC6AQ6EIG7 209 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 TIFABQ6ZNK6 161 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 ATPAF2Q8N5M1 289 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 ATP6V1E2Q96A05 226 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 PIF1Q9H611 641 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 TMEM30AQ9NV96 361 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 DNAJC28Q9NX36 388 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 GIMAP2Q9UG22 337 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 AURKCQ9UQB9 309 aa13.71□□□□□ -0.22
VHL-201ENST00000256474 FAM95CA0A1B0GW59 222 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 MLNP12872 115 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 DARSP14868 501 aaKnown RBP13.7□□□□□ -0.22
VHL-201ENST00000256474 CYP2B6P20813 491 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 RANBP1P43487 201 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 CLCNKBP51801 687 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 TLR1Q15399 786 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 KIF19Q2TAC6 998 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 RBM44Q6ZP01 1051 aaKnown RBP13.7□□□□□ -0.22
VHL-201ENST00000256474 OR9I1Q8NGQ6 314 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 COLEC11Q9BWP8 271 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 GMPR2Q9P2T1 348 aaKnown RBP13.7□□□□□ -0.22
VHL-201ENST00000256474 CRYL1Q9Y2S2 319 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 ASB3Q9Y575 518 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 CCL15-CCL14A0A0B4J2E2 113 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 ALDH1A2O94788 518 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 CLPTM1O96005 669 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 STMN1P16949 149 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 GRIA2P42262 883 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 MAGEA6P43360 314 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 BRCC3P46736 316 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 SNX17Q15036 470 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 CCL15Q16663 113 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 PPP1R3AQ16821 1122 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 ANO4Q32M45 955 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 EPGNQ6UW88 154 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 CEP97Q8IW35 865 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 KLHL5Q96PQ7 755 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 NR1H4Q96RI1 486 aaPredicted RBP13.7□□□□□ -0.22
VHL-201ENST00000256474 NPY6RQ99463 290 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 CAAP1Q9H8G2 361 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 GPAMQ9HCL2 828 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 ADARB2Q9NS39 739 aaKnown RBP13.7□□□□□ -0.22
VHL-201ENST00000256474 RBM22Q9NW64 420 aaKnown RBP eCLIP13.7□□□□□ -0.22
VHL-201ENST00000256474 CPA4Q9UI42 421 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 MTF2Q9Y483 593 aaPredicted RBP13.7□□□□□ -0.22
VHL-201ENST00000256474 AP4B1Q9Y6B7 739 aa13.7□□□□□ -0.22
VHL-201ENST00000256474 SF3B1O75533 1304 aaKnown RBP eCLIP13.7□□□□□ -0.22
VHL-201ENST00000256474 A0A1B0GTW7 788 aa13.69□□□□□ -0.22
VHL-201ENST00000256474 CXCL11O14625 94 aa13.69□□□□□ -0.22
VHL-201ENST00000256474 SUPT7LO94864 414 aa13.69□□□□□ -0.22
VHL-201ENST00000256474 SPATA31D3P0C874 917 aa13.69□□□□□ -0.22
VHL-201ENST00000256474 SCNN1GP51170 649 aa13.69□□□□□ -0.22
VHL-201ENST00000256474 ARPP19P56211 112 aa13.69□□□□□ -0.22
VHL-201ENST00000256474 OTUD1Q5VV17 481 aaPredicted RBP13.69□□□□□ -0.22
VHL-201ENST00000256474 ITPRIPL1Q6GPH6 555 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms