RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 OSCP1Q8WVF1 389 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 COPS5Q92905 334 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 HAPLN3Q96S86 360 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TRMOQ9BU70 441 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 INO80BQ9C086 356 aaPredicted RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 EPS8L2Q9H6S3 715 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 WDR6Q9NNW5 1121 aaKnown RBP4.22□□□□□ -1.73
UBE4A-201ENST00000252108 TMEM9Q9P0T7 183 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SUN2Q9UH99 717 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 SLC7A8Q9UHI5 535 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 PHF24Q9UPV7 400 aa4.22□□□□□ -1.73
UBE4A-201ENST00000252108 MIA3Q5JRA6 1907 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 A0A0A0MRY4 1105 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 CCDC162PA2VCL2 907 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 INO80B-WBP1J3KQ70 363 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 AIM2O14862 343 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 MAP3K13O43283 966 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 SNAP91O60641 907 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 SIN3BO75182 1162 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 TRMUO75648 421 aaKnown RBP4.21□□□□□ -1.73
UBE4A-201ENST00000252108 PROCP04070 461 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 ASLP04424 464 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 LRPAP1P30533 357 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 PNPLA4P41247 253 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 RPL14P50914 215 aaKnown RBP4.21□□□□□ -1.73
UBE4A-201ENST00000252108 SP4Q02446 784 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 SQLEQ14534 574 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 GEN1Q17RS7 908 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 SOWAHAQ2M3V2 549 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 ANO4Q32M45 955 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 PMF1Q6P1K2 205 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 SLC26A9Q7LBE3 791 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 COLGALT2Q8IYK4 626 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 ADGRF2Q8IZF7 708 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 TMCO5AQ8N6Q1 288 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 CCNYQ8ND76 341 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 HIPK4Q8NE63 616 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 PPHLN1Q8NEY8 458 aaKnown RBP4.21□□□□□ -1.73
UBE4A-201ENST00000252108 TMEM40Q8WWA1 233 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 NMD3Q96D46 503 aaKnown RBP4.21□□□□□ -1.73
UBE4A-201ENST00000252108 DCUN1D1Q96GG9 259 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 SPATA13Q96N96 652 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 RTP3Q9BQQ7 232 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 DHX35Q9H5Z1 703 aaKnown RBP4.21□□□□□ -1.73
UBE4A-201ENST00000252108 CLK4Q9HAZ1 481 aaKnown RBP4.21□□□□□ -1.73
UBE4A-201ENST00000252108 ATAD3AQ9NVI7 634 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 GALNT8Q9NY28 637 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 MARCOQ9UEW3 520 aaPredicted RBP4.21□□□□□ -1.73
UBE4A-201ENST00000252108 LZTS1Q9Y250 596 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 ST14Q9Y5Y6 855 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 AP4B1Q9Y6B7 739 aa4.21□□□□□ -1.73
UBE4A-201ENST00000252108 A0A087X1B8 175 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 CXorf49A8MYA2 514 aaPredicted RBP4.21□□□□□ -1.74
UBE4A-201ENST00000252108 TADA2AO75478 443 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 LGALS2P05162 132 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 CXCL8P10145 99 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 ENO3P13929 434 aaPredicted RBP4.21□□□□□ -1.74
UBE4A-201ENST00000252108 HARS2P49590 506 aaKnown RBP4.21□□□□□ -1.74
UBE4A-201ENST00000252108 INHBEP58166 350 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 MGAT3Q09327 533 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 NDUFA5Q16718 116 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 INTS6LQ5JSJ4 861 aaKnown RBP4.21□□□□□ -1.74
UBE4A-201ENST00000252108 IRAK1BP1Q5VVH5 260 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 NCBP2-AS2Q69YL0 99 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 LRRC8BQ6P9F7 803 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 RNF34Q969K3 372 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 CNBD2Q96M20 576 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 QKIQ96PU8 341 aaKnown RBP eCLIP4.21□□□□□ -1.743e-12■■■□□ 19
UBE4A-201ENST00000252108 SORT1Q99523 831 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 PTPN18Q99952 460 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 PRKD2Q9BZL6 878 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 PCDH18Q9HCL0 1135 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 FBXO6Q9NRD1 293 aaPredicted RBP4.21□□□□□ -1.74
UBE4A-201ENST00000252108 ARMCX1Q9P291 453 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 BARX2Q9UMQ3 279 aaPredicted RBP4.21□□□□□ -1.74
UBE4A-201ENST00000252108 PCDHB9Q9Y5E1 797 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 MUC22E2RYF6 1773 aaPredicted RBP4.21□□□□□ -1.74
UBE4A-201ENST00000252108 PRR5-ARHGAP8B1AHC4 643 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 DCLK1O15075 740 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 ANXA9O76027 345 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 XPAP23025 273 aaPredicted RBP4.21□□□□□ -1.74
UBE4A-201ENST00000252108 ARHGAP8P85298 464 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 KLF10Q13118 480 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 SLC12A1Q13621 1099 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 LPIN1Q14693 890 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 DCAF4L1Q3SXM0 396 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF484Q5JVG2 852 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 ATF7IP2Q5U623 682 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 AGAP9Q5VTM2 703 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 BSPRYQ5W0U4 402 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 TRAF7Q6Q0C0 670 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 PACS1Q6VY07 963 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 RBM44Q6ZP01 1051 aaKnown RBP4.21□□□□□ -1.74
UBE4A-201ENST00000252108 FAM183BPQ6ZVS7 135 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 PIWIL4Q7Z3Z4 852 aaKnown RBP4.21□□□□□ -1.74
UBE4A-201ENST00000252108 RSPH3Q86UC2 560 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 ARRDC4Q8NCT1 418 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 TRAPPC12Q8WVT3 735 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 NRG4Q8WWG1 115 aa4.21□□□□□ -1.74
UBE4A-201ENST00000252108 S100ZQ8WXG8 99 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms