RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 RBM12BQ8IXT5 1001 aaKnown RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 SRRM1Q8IYB3 904 aaKnown RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CNTD1Q8N815 330 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 C7orf31Q8N865 590 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CCDC63Q8NA47 563 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CMASQ8NFW8 434 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 PRCCQ92733 491 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 TGS1Q96RS0 853 aaKnown RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CDT1Q9H211 546 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 NSUN3Q9H649 340 aaKnown RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 FGFR1OP2Q9NVK5 253 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 DNAJC17Q9NVM6 304 aaKnown RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 H2AFY2Q9P0M6 372 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CTNNAL1Q9UBT7 734 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 KIAA1257Q9ULG3 409 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 E7ESA3 106 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 LRCH4O75427 683 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CNMDO75829 334 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 ARIH2O95376 493 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CYP2C8P10632 490 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 VDRP11473 427 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 TCF4P15884 667 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CREB1P16220 341 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 TAC1P20366 129 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 KDELR1P24390 212 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 SLC8A1P32418 973 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 RFC1P35251 1148 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 GTF2A1P52655 376 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 RAD23BP54727 409 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 ARL4CP56559 192 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 PSMC1P62191 440 aaKnown RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 MBTD1Q05BQ5 628 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 CACNB2Q08289 660 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 SPARCL1Q14515 664 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 STILQ15468 1287 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 LY6KQ17RY6 165 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 SPDYAQ5MJ70 313 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 DENND1BQ6P3S1 775 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 RPAINQ86UA6 219 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 VSIG1Q86XK7 387 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 ERO1BQ86YB8 467 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 PHYKPLQ8IUZ5 450 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 ANKRD42Q8N9B4 389 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 ATP11CQ8NB49 1132 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 DENND1AQ8TEH3 1009 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 AFG1LQ8WV93 481 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 MCRS1Q96EZ8 462 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 PWWP2AQ96N64 755 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 TMEM209Q96SK2 561 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 NCAPGQ9BPX3 1015 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 MROH8Q9H579 483 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 PSMC3IPQ9P2W1 217 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 SIX4Q9UIU6 781 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 ZMYND8Q9ULU4 1186 aaPredicted RBP8.14□□□□□ -1.11
CXCR4-201ENST00000241393 FZD1Q9UP38 647 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 AGTPBP1Q9UPW5 1226 aa8.14□□□□□ -1.11
CXCR4-201ENST00000241393 COL1A2P08123 1366 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 INO80B-WBP1J3KQ70 363 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 APOC4-APOC2K7ER74 178 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 K7ESF4 209 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 SGK1O00141 431 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 ATP5HO75947 161 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 RNF8O76064 485 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 APOC2P02655 101 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 CD19P15391 556 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 GCAP28676 217 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 STIP1P31948 543 aaKnown RBP8.13□□□□□ -1.11
CXCR4-201ENST00000241393 PPARDQ03181 441 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 INCA1Q0VD86 236 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 DBPQ10586 325 aaPredicted RBP8.13□□□□□ -1.11
CXCR4-201ENST00000241393 MYO1EQ12965 1108 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 BNIP1Q12981 228 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 TMED2Q15363 201 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 KLHL38Q2WGJ6 581 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 HSDL1Q3SXM5 330 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 TXNRD3NBQ6F5E7 133 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 TEPPQ6URK8 271 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 CD300LDQ6UXZ3 194 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 XYLT1Q86Y38 959 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 RHPN2Q8IUC4 686 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 LRRC71Q8N4P6 559 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 NAT8LQ8N9F0 302 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 GLIS1Q8NBF1 620 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 SLC4A11Q8NBS3 891 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 SHCBP1Q8NEM2 672 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 ACTL9Q8TC94 416 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 MGARPQ8TDB4 240 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 SPATA33Q96N06 139 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 ACAP3Q96P50 834 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 SMC6Q96SB8 1091 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 FAM118BQ9BPY3 351 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 FRMD8Q9BZ67 464 aaPredicted RBP8.13□□□□□ -1.11
CXCR4-201ENST00000241393 INO80BQ9C086 356 aaPredicted RBP8.13□□□□□ -1.11
CXCR4-201ENST00000241393 TRABDQ9H4I3 376 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 RSAD1Q9HA92 442 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 KLHL11Q9NVR0 708 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 ASNSD1Q9NWL6 643 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 ERAP1Q9NZ08 941 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 ANK1P16157 1881 aa8.13□□□□□ -1.11
CXCR4-201ENST00000241393 DICER1Q9UPY3 1922 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms