RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 DBTP11182 482 aaKnown RBP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 CKMT2P17540 419 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 POLR2EP19388 210 aaKnown RBP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 MSH3P20585 1137 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 RPS9P46781 194 aaKnown RBP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 GDF10P55107 478 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 TRIM32Q13049 653 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 ZNF470Q6ECI4 717 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 SPESP1Q6UW49 350 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 JOSD2Q8TAC2 188 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 ENKURQ8TC29 256 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 FAM120BQ96EK7 910 aaKnown RBP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 SNRNP25Q9BV90 132 aaKnown RBP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 TRIM62Q9BVG3 475 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 CD320Q9NPF0 282 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 MPP6Q9NZW5 540 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 TMEM216Q9P0N5 145 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 RNF112Q9ULX5 631 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 PCDHGB4Q9UN71 923 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 RAD54BQ9Y620 910 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 LOC100506127A0A0U1RQW1 187 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 FAM149AA5PLN7 773 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 SAGE2PA6NJ88 616 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 E5RJQ4 531 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 SLC22A2O15244 555 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 KCNQ2O43526 872 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 SNHG28P0DPA3 235 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 TPSB2P20231 275 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 TKTP29401 623 aaKnown RBP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 SLC7A1P30825 629 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 CDH8P55286 799 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 ZNF235Q14590 738 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 TPSAB1Q15661 275 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 ARL13AQ5H913 290 aaPredicted RBP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 DENND5AQ6IQ26 1287 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 MRNIPQ6NTE8 343 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 MPZL3Q6UWV2 235 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 THAP5Q7Z6K1 395 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 ANKRD52Q8NB46 1076 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 FLCNQ8NFG4 579 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 ITPKCQ96DU7 683 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 BIRC8Q96P09 236 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 CRAMP1Q96RY5 1269 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 ZNF670Q9BS34 389 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 GATA5Q9BWX5 397 aaPredicted RBP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 FAM49AQ9H0Q0 323 aaPredicted RBP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 MARCH7Q9H992 704 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 DDX43Q9NXZ2 648 aaKnown RBP9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 EHD3Q9NZN3 535 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 TMEM9Q9P0T7 183 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 POLG2Q9UHN1 485 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 NUDT5Q9UKK9 219 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 KAT6AQ92794 2004 aa9.66□□□□□ -0.86
NUDCD1-201ENST00000239690 SF3B1O75533 1304 aaKnown RBP eCLIP9.66□□□□□ -0.866e-6■■■■■ 59.7
NUDCD1-201ENST00000239690 A0A088AWK7 358 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DENRO43583 198 aaKnown RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 VPS4BO75351 444 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 ZNF682O95780 498 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 TFPTP0C1Z6 253 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 CSH1P0DML2 217 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 CSH2P0DML3 217 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 GRIK1P39086 918 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 CLK2P49760 499 aaKnown RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 RHBDL3P58872 404 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 TIMM50Q3ZCQ8 353 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 PPM1JQ5JR12 505 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 IL23RQ5VWK5 629 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 FAM45BPQ6NSW5 357 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 LRRC71Q8N4P6 559 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 SAMD3Q8N6K7 520 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 PABPC5Q96DU9 382 aaKnown RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 FAM84AQ96KN4 292 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 PRICKLE1Q96MT3 831 aaPredicted RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 HAPLN3Q96S86 360 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 IL22Q9GZX6 179 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 ZNRF3Q9ULT6 936 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 WBP11Q9Y2W2 641 aaKnown RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 A0A1B0GW55 424 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 ATP6AP2A0A1C7CYW4 349 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 MAGEB3O15480 346 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 TNFRSF21O75509 655 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 ATP6AP2O75787 350 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 MYO1DO94832 1006 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DUX4L2P0CJ85 424 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DUX4L3P0CJ86 424 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DUX4L4P0CJ87 422 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DUX4L5P0CJ88 424 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DUX4L6P0CJ89 424 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DUX4L7P0CJ90 424 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 MLNP12872 115 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 SEPHS1P49903 392 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 MERTKQ12866 999 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 PDZK1Q5T2W1 519 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 STRIP1Q5VSL9 837 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 PRR5LQ6MZQ0 368 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 PSTKQ8IV42 348 aaKnown RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 C19orf18Q8NEA5 215 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 APPL2Q8NEU8 664 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 KBTBD8Q8NFY9 601 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms