RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 ERCC2P18074 760 aa11.17□□□□□ -0.62
CCDC170-201ENST00000239374 FSTL4Q6MZW2 842 aa11.17□□□□□ -0.62
CCDC170-201ENST00000239374 DRAXINQ8NBI3 349 aaPredicted RBP11.17□□□□□ -0.62
CCDC170-201ENST00000239374 FBXO27Q8NI29 283 aa11.17□□□□□ -0.62
CCDC170-201ENST00000239374 ALG9Q9H6U8 611 aa11.17□□□□□ -0.62
CCDC170-201ENST00000239374 UTP6Q9NYH9 597 aaKnown RBP11.17□□□□□ -0.62
CCDC170-201ENST00000239374 NOVP48745 357 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 SLC26A2P50443 739 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 MSLNQ13421 630 aaPredicted RBP11.16□□□□□ -0.62
CCDC170-201ENST00000239374 PPM1LQ5SGD2 360 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 P3H2Q8IVL5 708 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 CCDC103Q8IW40 242 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 C1orf127Q8N9H9 656 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 COQ10BQ9H8M1 238 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 ATAD3AQ9NVI7 634 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 DNAAF2Q9NVR5 837 aaKnown RBP11.16□□□□□ -0.62
CCDC170-201ENST00000239374 LAMB4A4D0S4 1761 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 TTLL13PA6NNM8 815 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 H3BSA7 217 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 DYNC1LI2O43237 492 aaPredicted RBP11.16□□□□□ -0.62
CCDC170-201ENST00000239374 B4GALT4O60513 344 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 CHRNGP07510 517 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 CHRM1P11229 460 aaPredicted RBP11.16□□□□□ -0.62
CCDC170-201ENST00000239374 PRDX6P30041 224 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 CCR3P51677 355 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 RAB10P61026 200 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 SLC25A11Q02978 314 aaKnown RBP11.16□□□□□ -0.62
CCDC170-201ENST00000239374 WNT8BQ93098 351 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 RBBP8Q99708 897 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 NT5MQ9NPB1 228 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 SELENONQ9NZV5 590 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 ANAPC2Q9UJX6 822 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 MTF2Q9Y483 593 aaPredicted RBP11.16□□□□□ -0.62
CCDC170-201ENST00000239374 C10orf71Q711Q0 1435 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 MYO5AQ9Y4I1 1855 aaKnown RBP11.16□□□□□ -0.62
CCDC170-201ENST00000239374 FAM149AA5PLN7 773 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 MFSD11O43934 449 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 GCATO75600 419 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 PCSK1P29120 753 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 OAZ1P54368 228 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 IL5RAQ01344 420 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 DPYSQ14117 519 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 DMC1Q14565 340 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 CMPK2Q5EBM0 449 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 PMF1Q6P1K2 205 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 LCLAT1Q6UWP7 414 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 PIGZQ86VD9 579 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 OR52B2Q96RD2 323 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 TBL1YQ9BQ87 522 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 C1orf50Q9BV19 199 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 CHRAC1Q9NRG0 131 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 SIRPGQ9P1W8 387 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 SLC8A2Q9UPR5 921 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 TIMM13Q9Y5L4 95 aaPredicted RBP11.16□□□□□ -0.62
CCDC170-201ENST00000239374 PSMB9P28065 219 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 NOS2P35228 1153 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 SFSWAPQ12872 951 aaKnown RBP11.16□□□□□ -0.62
CCDC170-201ENST00000239374 RDH11Q8TC12 318 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 CRYGNQ8WXF5 182 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 CRYL1Q9Y2S2 319 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 ATRNL1Q5VV63 1379 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 ZNF142P52746 1687 aaPredicted RBP11.16□□□□□ -0.62
CCDC170-201ENST00000239374 ROBO1Q9Y6N7 1651 aa11.16□□□□□ -0.62
CCDC170-201ENST00000239374 PTPRJQ12913 1337 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.15□□□□□ -0.62
CCDC170-201ENST00000239374 A0A1B0GVG6 124 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 STX16-NPEPL1H3BU86 382 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 NRP2O60462 931 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 ASLP04424 464 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 F7P08709 466 aaPredicted RBP11.15□□□□□ -0.62
CCDC170-201ENST00000239374 ARL2P36404 184 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 LIMK2P53671 638 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 FAM98BQ52LJ0 330 aaKnown RBP11.15□□□□□ -0.62
CCDC170-201ENST00000239374 TNFAIP8L3Q5GJ75 292 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 FKBP1CQ5VVH2 108 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 KIAA0319LQ8IZA0 1049 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 FIG4Q92562 907 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 GRIN3BO60391 1043 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 CCR1P32246 355 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 CDH13P55290 713 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 PCID2Q5JVF3 399 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 SPATA2LQ8IUW3 424 aaPredicted RBP11.15□□□□□ -0.62
CCDC170-201ENST00000239374 PYROXD2Q8N2H3 581 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 SNX19Q92543 992 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 MAGED4Q96JG8 741 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 VAT1Q99536 393 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 RGS18Q9NS28 235 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 HES2Q9Y543 173 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 CLASP2O75122 1294 aaKnown RBP11.15□□□□□ -0.62
CCDC170-201ENST00000239374 RFPL1O75677 317 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 SLC25A27O95847 323 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 ZNF286BP0CG31 522 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 TMEM132BQ14DG7 1078 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 PLCL1Q15111 1095 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 LRRC8DQ7L1W4 858 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 KBTBD2Q8IY47 623 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 BORCS5Q969J3 196 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 QKIQ96PU8 341 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCDC170-201ENST00000239374 AGAP2Q99490 1192 aa11.15□□□□□ -0.62
CCDC170-201ENST00000239374 OSMRQ99650 979 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms