RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CXorf51AA0A1B0GTR3 108 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 F5H5T6 163 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 MATN3O15232 486 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 CACNG3O60359 315 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 ECI2O75521 394 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 ANXA9O76027 345 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 TMEM63AO94886 807 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 ACSL3O95573 720 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 OLFM2O95897 454 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 APRTP07741 180 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 VAV1P15498 845 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 GJA1P17302 382 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 PTPN3P26045 913 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 NBL1P41271 181 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 MMP13P45452 471 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 RENBPP51606 427 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 WASHC5Q12768 1159 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 NAB1Q13506 487 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 HNRNPDQ14103 355 aaKnown RBP13.47□□□□□ -0.25
SLIRP-201ENST00000238688 FRG1Q14331 258 aaKnown RBP13.47□□□□□ -0.25
SLIRP-201ENST00000238688 KYNUQ16719 465 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 FAM78AQ5JUQ0 283 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 PIK3R6Q5UE93 754 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 LRRC8BQ6P9F7 803 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 ZNF783Q6ZMS7 281 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 CHST9Q7L1S5 443 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 DNAJB7Q7Z6W7 309 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-201ENST00000238688 TMC8Q8IU68 726 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 KIAA1958Q8N8K9 716 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 CCDC110Q8TBZ0 833 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 NSMCE1Q8WV22 266 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 TEKT5Q96M29 485 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 ZNF599Q96NL3 588 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 GCNAQ96QF7 691 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 IL12RB2Q99665 862 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 PRMT1Q99873 361 aaKnown RBP13.47□□□□□ -0.25
SLIRP-201ENST00000238688 FOXQ1Q9C009 403 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 SIK2Q9H0K1 926 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 IRF2BPLQ9H1B7 796 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 ACSS3Q9H6R3 686 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 ETNK1Q9HBU6 452 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 KLHL8Q9P2G9 620 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-201ENST00000238688 TEX264Q9Y6I9 313 aa13.47□□□□□ -0.25
SLIRP-201ENST00000238688 MAGEB16A2A368 324 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 ACSL4O60488 711 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 CLDN11O75508 207 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 AP2A1O95782 977 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 DCNP07585 359 aaKnown RBP13.46□□□□□ -0.25
SLIRP-201ENST00000238688 NR1D1P20393 614 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 LMAN1P49257 510 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 CBX1P83916 185 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 ILF2Q12905 390 aaKnown RBP13.46□□□□□ -0.25
SLIRP-201ENST00000238688 ANGPT1Q15389 498 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 SLC14A2Q15849 920 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 SLC44A4Q53GD3 710 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 TTMPQ5BVD1 217 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 NAPEPLDQ6IQ20 393 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 ARHGAP12Q8IWW6 846 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 PALM2Q8IXS6 379 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 ZNF567Q8N184 647 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 NPWQ8N729 165 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 SHKBP1Q8TBC3 707 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 GIPC2Q8TF65 315 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 MAML1Q92585 1016 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 ELSPBP1Q96BH3 223 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 ASB16Q96NS5 453 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 CYTH2Q99418 400 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 LRRC40Q9H9A6 602 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 LRRC4CQ9HCJ2 640 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 TMPRSS4Q9NRS4 437 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 VPS45Q9NRW7 570 aa13.46□□□□□ -0.25
SLIRP-201ENST00000238688 MAGED2Q9UNF1 606 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-201ENST00000238688 MTF2Q9Y483 593 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-201ENST00000238688 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.26
SLIRP-201ENST00000238688 OTOGLQ3ZCN5 2332 aa13.46□□□□□ -0.26
SLIRP-201ENST00000238688 NYNRINQ9P2P1 1898 aaKnown RBP13.46□□□□□ -0.26
SLIRP-201ENST00000238688 EXOC1LA0A1B0GW35 172 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 TYW5A2RUC4 315 aaKnown RBP13.45□□□□□ -0.26
SLIRP-201ENST00000238688 ZNF197O14709 1029 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 SOAT2O75908 522 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 MOCS2O96007 188 aaPredicted RBP13.45□□□□□ -0.26
SLIRP-201ENST00000238688 CCNB1P14635 433 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 PGFP49763 221 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 SLC18A1P54219 525 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 CDH4P55283 916 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 FZD5Q13467 585 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 MLF2Q15773 248 aaPredicted RBP13.45□□□□□ -0.26
SLIRP-201ENST00000238688 ARTNQ5T4W7 220 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 ADGRF1Q5T601 910 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 ANKRD22Q5VYY1 191 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 ASCL5Q7RTU5 278 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 PID1Q7Z2X4 250 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 SETD3Q86TU7 594 aaPredicted RBP13.45□□□□□ -0.26
SLIRP-201ENST00000238688 CHSY1Q86X52 802 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 MIB1Q86YT6 1006 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 PJA1Q8NG27 643 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 PTCD2Q8WV60 388 aaKnown RBP13.45□□□□□ -0.26
SLIRP-201ENST00000238688 MRPS31Q92665 395 aaKnown RBP13.45□□□□□ -0.26
SLIRP-201ENST00000238688 ARL8AQ96BM9 186 aa13.45□□□□□ -0.26
SLIRP-201ENST00000238688 RSPRY1Q96DX4 576 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms