RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 OTULINQ96BN8 352 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 NSMCE2Q96MF7 247 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 SDCBP2Q9H190 292 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 LIMD1Q9UGP4 676 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 SORCS3Q9UPU3 1222 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 RAP2CQ9Y3L5 183 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 SPEF2Q9C093 1822 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 KANSL1LA0AUZ9 987 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 KLRG2A4D1S0 409 aaPredicted RBP13.93□□□□□ -0.18
NFKB1-201ENST00000226574 MOXD2PA6NHM9 499 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 BIRC5O15392 142 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 MAGEC1O60732 1142 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 TCEA3O75764 348 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 SOAT2O75908 522 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 LMO2P25791 158 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 ACTR3P61158 418 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 MPP1Q00013 466 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 TRIM60Q495X7 471 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 EMC10Q5UCC4 262 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 DENND6AQ8IWF6 608 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 FAM126BQ8IXS8 530 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 HS6ST3Q8IZP7 471 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 ANKRD52Q8NB46 1076 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 LPPQ93052 612 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 DGCR14Q96DF8 476 aaKnown RBP13.93□□□□□ -0.18
NFKB1-201ENST00000226574 BLOC1S6Q9UL45 172 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 PSMD13Q9UNM6 376 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 SLC12A8A0AV02 714 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 C2CD4BA6NLJ0 364 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 RGS5O15539 181 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 TYROBPO43914 113 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 DAB1O75553 588 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 PSMB9P28065 219 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 FMO4P31512 558 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 THPOP40225 353 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 IRF9Q00978 393 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 LSM12Q3MHD2 195 aaKnown RBP13.93□□□□□ -0.18
NFKB1-201ENST00000226574 SLC9B1Q4ZJI4 515 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 FRMD7Q6ZUT3 714 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 B3GALNT2Q8NCR0 500 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 FBXO27Q8NI29 283 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 APBB2Q92870 758 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 OR52B2Q96RD2 323 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 MINDY3Q9H8M7 445 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 DTLQ9NZJ0 730 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 RPL26L1Q9UNX3 145 aaKnown RBP13.93□□□□□ -0.18
NFKB1-201ENST00000226574 MFHAS1Q9Y4C4 1052 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 COMMD3-BMI1R4GMX3 469 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 ARFGEF2Q9Y6D5 1785 aa13.93□□□□□ -0.18
NFKB1-201ENST00000226574 MYH3P11055 1940 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 CBX4O00257 560 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 OR6B1O95007 311 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 TGDSO95455 350 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 BCL10O95999 233 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 LDLRP01130 860 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 LINGO3P0C6S8 592 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 ADORA2AP29274 412 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 ARL2P36404 184 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 CCR10P46092 362 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 SLC26A2P50443 739 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 VAC14Q08AM6 782 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 SAMD4BQ5PRF9 694 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 RPS27LQ71UM5 84 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 CTU1Q7Z7A3 348 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 PTGR2Q8N8N7 351 aaPredicted RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 ZC3H15Q8WU90 426 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 PPP1R10Q96QC0 940 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 KCTD15Q96SI1 283 aaPredicted RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 SMAD5Q99717 465 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 SLC25A23Q9BV35 468 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 IL22Q9GZX6 179 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 LHX5Q9H2C1 402 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 LIN28AQ9H9Z2 209 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 ATP11BQ9Y2G3 1177 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 PSAT1Q9Y617 370 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 KDM3BQ7LBC6 1761 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 ADCY6O43306 1168 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 HSMCR30P0CW71 290 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 HGFP14210 728 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 SLC2A4P14672 509 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 KLF1Q13351 362 aaPredicted RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 SNAPC2Q13487 334 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 CNPY1Q3B7I2 92 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 LDLRAP1Q5SW96 308 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 METTL6Q8TCB7 284 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 LPGAT1Q92604 370 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 ESAMQ96AP7 390 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 RIC8BQ9NVN3 520 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 SFMBT1Q9UHJ3 866 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 MAGEB16A2A368 324 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 SNRPB2P08579 225 aaKnown RBP13.92□□□□□ -0.18
NFKB1-201ENST00000226574 LINC00032P0C843 101 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 AKT1P31749 480 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 CD86P42081 329 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 GPD2P43304 727 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 NPY2RP49146 381 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 ERO1BQ86YB8 467 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 OFCC1Q8IZS5 231 aa13.92□□□□□ -0.18
NFKB1-201ENST00000226574 ZNF567Q8N184 647 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms