RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 MAXP61244 160 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 GRB14Q14449 540 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 LRRC8EQ6NSJ5 796 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 PLD6Q8N2A8 252 aaKnown RBP15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 CENPIQ92674 756 aaPredicted RBP15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 RMDN1Q96DB5 314 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 FCRL3Q96P31 734 aaPredicted RBP15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 SMOQ99835 787 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 SSC5DA1L4H1 1573 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 TRPC5OSA6NMA1 111 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 ZNF460Q14592 562 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 PAFAH1B3Q15102 231 aaKnown RBP15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 C10orf120Q5SQS8 335 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 ENDOVQ8N8Q3 282 aaKnown RBP15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 TEKT5Q96M29 485 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 UPF3AQ9H1J1 476 aaKnown RBP15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 RAP2CQ9Y3L5 183 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 LRRC42Q9Y546 428 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 CHRNGP07510 517 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 MRPS22P82650 360 aaKnown RBP15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 MPP1Q00013 466 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 NSUN2Q08J23 767 aaKnown RBP eCLIP15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 LIPMQ5VYY2 423 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 NAIF1Q69YI7 327 aaPredicted RBP15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 ZNF534Q76KX8 674 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 DENND6AQ8IWF6 608 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 SCAMP5Q8TAC9 235 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 POMKQ9H5K3 350 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 ANKRD6Q9Y2G4 727 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 PCDHB12Q9Y5F1 795 aa15.18■□□□□ 0.02
UBE2D4-201ENST00000222402 SLCO1B7G3V0H7 640 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 PAGE1O75459 146 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ZNF135P52742 658 aaPredicted RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 PGGT1BP53609 377 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 PPIDQ08752 370 aaKnown RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ZBTB17Q13105 803 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 SLC39A12Q504Y0 691 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ARL13AQ5H913 290 aaPredicted RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 MARC1Q5VT66 337 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ANO7Q6IWH7 933 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 DCLRE1AQ6PJP8 1040 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 DHDDSQ86SQ9 333 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 LZTR1Q8N653 840 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ARRDC4Q8NCT1 418 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 PPP2R3CQ969Q6 453 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 LENG8Q96PV6 779 aaPredicted RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 SEPT5Q99719 369 aaPredicted RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 PDP2Q9P2J9 529 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 TSR3Q9UJK0 312 aaKnown RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 MAGEA6P43360 314 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 PDAP1Q13442 181 aaKnown RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 MGAT5BQ3V5L5 792 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 TIGD5Q53EQ6 642 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 LPCAT4Q643R3 524 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 KRT80Q6KB66 452 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ESRP1Q6NXG1 681 aaKnown RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 MOCOSQ96EN8 888 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 IL1RL2Q9HB29 575 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ENTPD7Q9NQZ7 604 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ABCC13Q9NSE7 274 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 FBXO5Q9UKT4 447 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 DSEQ9UL01 958 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 RAD54BQ9Y620 910 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 POLR2AP24928 1970 aaKnown RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ARL5CA6NH57 179 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 GABBR2O75899 941 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 CABYRO75952 493 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 HNRNPLP14866 589 aaKnown RBP eCLIP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ACTR3P61158 418 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 MAPRE2Q15555 327 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ZBTB6Q15916 424 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 HABP4Q5JVS0 413 aaKnown RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 DCP1BQ8IZD4 617 aaKnown RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 NTAN1Q96AB6 310 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 PPP1R2P1Q96PQ5 205 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 PANX3Q96QZ0 392 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 ECSITQ9BQ95 431 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 C20orf27Q9GZN8 174 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 SUDS3Q9H7L9 328 aaPredicted RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 GLOD4Q9HC38 313 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 SARS2Q9NP81 518 aaKnown RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 DNAJC28Q9NX36 388 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 CDH22Q9UJ99 828 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 BUD23O43709 281 aaKnown RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 OR4Q2P0C623 313 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 PIK3R1P27986 724 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 RAB10P61026 200 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 CTC1Q2NKJ3 1217 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 SLC9B1Q4ZJI4 515 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 AGKQ53H12 422 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 GPRIN1Q7Z2K8 1008 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 KCTD13Q8WZ19 329 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 EME1Q96AY2 570 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 RCN3Q96D15 328 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 TSPAN18Q96SJ8 248 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 MRPL46Q9H2W6 279 aaKnown RBP15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 MKS1Q9NXB0 559 aa15.17■□□□□ 0.02
UBE2D4-201ENST00000222402 TMEM114B3SHH9 223 aa15.16■□□□□ 0.02
UBE2D4-201ENST00000222402 GNAZP19086 355 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms