RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 CCDC153Q494R4 210 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 LINC00523Q86TU6 105 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 TSGA13Q96PP4 275 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 HAPLN3Q96S86 360 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 CFHR5Q9BXR6 569 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 ABCC13Q9NSE7 274 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 ARHGEF38Q9NXL2 777 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 PPM1HQ9ULR3 514 aa22.58■■□□□ 1.2
CCDC9-201ENST00000221922 F8W810 466 aa22.57■■□□□ 1.2
CCDC9-201ENST00000221922 TMEM189-UBE2V1I3L0A0 370 aa22.57■■□□□ 1.2
CCDC9-201ENST00000221922 CDK7P50613 346 aa22.57■■□□□ 1.2
CCDC9-201ENST00000221922 LIMK2P53671 638 aa22.57■■□□□ 1.2
CCDC9-201ENST00000221922 FAM189BP81408 668 aa22.57■■□□□ 1.2
CCDC9-201ENST00000221922 OLIG2Q13516 323 aa22.57■■□□□ 1.2
CCDC9-201ENST00000221922 EIF4EBP2Q13542 120 aaPredicted RBP22.57■■□□□ 1.2
CCDC9-201ENST00000221922 MBTPS1Q14703 1052 aa22.57■■□□□ 1.2
CCDC9-201ENST00000221922 PGM2L1Q6PCE3 622 aa22.57■■□□□ 1.2
CCDC9-201ENST00000221922 SPATA2LQ8IUW3 424 aaPredicted RBP22.57■■□□□ 1.2
CCDC9-201ENST00000221922 TRPV6Q9H1D0 765 aa22.57■■□□□ 1.2
CCDC9-201ENST00000221922 ZCWPW2A0A1B0GU75 182 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 IRAK2O43187 625 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 JCHAINP01591 159 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 DSG1Q02413 1049 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 CLLU1OSQ5K130 101 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 SLC43A3Q8NBI5 491 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 LINC01599Q8WXQ3 324 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 DPF3Q92784 378 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 SNX15Q9NRS6 342 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 FGF10O15520 208 aaPredicted RBP22.56■■□□□ 1.2
CCDC9-201ENST00000221922 B4GALT3O60512 393 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 CPA3P15088 417 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 PEX19P40855 299 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 CSE1LP55060 971 aaKnown RBP22.56■■□□□ 1.2
CCDC9-201ENST00000221922 CDH17Q12864 832 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 RWDD4Q6NW29 188 aaKnown RBP22.56■■□□□ 1.2
CCDC9-201ENST00000221922 STRA8Q7Z7C7 330 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 KLHDC8BQ8IXV7 354 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 LZTR1Q8N653 840 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 URGCPQ8TCY9 931 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 PXYLP1Q8TE99 480 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 TTC1Q99614 292 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 ECSITQ9BQ95 431 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 S100A14Q9HCY8 104 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 IL1RAPL1Q9NZN1 696 aa22.56■■□□□ 1.2
CCDC9-201ENST00000221922 TNFRSF10BO14763 440 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 BUD23O43709 281 aaKnown RBP22.55■■□□□ 1.2
CCDC9-201ENST00000221922 DDHD2O94830 711 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 FESP07332 822 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 SRGAP2BP0DMP2 458 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 CCNCP24863 283 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 NOMO2Q5JPE7 1267 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 BTBD8Q5XKL5 378 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 IZUMO2Q6UXV1 221 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 DCLK2Q8N568 766 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 POU5F2Q8N7G0 328 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 SCAMP5Q8TAC9 235 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 ACTRT2Q8TDY3 377 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 ZNF483Q8TF39 744 aaPredicted RBP22.55■■□□□ 1.2
CCDC9-201ENST00000221922 CELF6Q96J87 481 aaKnown RBP22.55■■□□□ 1.2
CCDC9-201ENST00000221922 CATSPERBQ9H7T0 1116 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 NSMCE4AQ9NXX6 385 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 AAR2Q9Y312 384 aaKnown RBP22.55■■□□□ 1.2
CCDC9-201ENST00000221922 PCDHB12Q9Y5F1 795 aa22.55■■□□□ 1.2
CCDC9-201ENST00000221922 TIMM44O43615 452 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 ATP9BO43861 1147 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 MPOP05164 745 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 HOXC13P31276 330 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 SLC5A3P53794 718 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 ITGA9Q13797 1035 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 CERCAMQ5T4B2 595 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 NAIF1Q69YI7 327 aaPredicted RBP22.54■■□□□ 1.2
CCDC9-201ENST00000221922 PDPK2PQ6A1A2 396 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 ZNF280BQ86YH2 543 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 ATPAF2Q8N5M1 289 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 SLC25A41Q8N5S1 370 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 ZSCAN18Q8TBC5 510 aaPredicted RBP22.54■■□□□ 1.2
CCDC9-201ENST00000221922 CD99L2Q8TCZ2 262 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 CMTM5Q96DZ9 223 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 PPP1R2P1Q96PQ5 205 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 SMOC2Q9H3U7 446 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 CACNG3O60359 315 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 OAZ2O95190 189 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 CCR1P32246 355 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 RALGPS1Q5JS13 557 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 KCNMB4Q86W47 210 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 COLGALT2Q8IYK4 626 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 SHKBP1Q8TBC3 707 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 ZNF358Q9NW07 568 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 MYO16Q9Y6X6 1858 aa22.54■■□□□ 1.2
CCDC9-201ENST00000221922 A0A1W2PQ45 241 aaPredicted RBP22.53■■□□□ 1.2
CCDC9-201ENST00000221922 A0A1W2PQY0 241 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 MAP3K13O43283 966 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 AHCYL1O43865 530 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 BAG2O95816 211 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 PRDX6P30041 224 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 HADHAP40939 763 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 MPP3Q13368 585 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 CMC1Q7Z7K0 106 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 RAET1EQ8TD07 263 aa22.53■■□□□ 1.2
CCDC9-201ENST00000221922 CAPNS2Q96L46 248 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms