RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 FBXL18Q96ME1 805 aa10.74□□□□□ -0.69
VPS18-201ENST00000220509 SNRNP25Q9BV90 132 aaKnown RBP10.74□□□□□ -0.69
VPS18-201ENST00000220509 ELOVL4Q9GZR5 314 aa10.74□□□□□ -0.69
VPS18-201ENST00000220509 WWP1Q9H0M0 922 aa10.74□□□□□ -0.69
VPS18-201ENST00000220509 SCPEP1Q9HB40 452 aa10.74□□□□□ -0.69
VPS18-201ENST00000220509 TSR3Q9UJK0 312 aaKnown RBP10.74□□□□□ -0.69
VPS18-201ENST00000220509 PCDHGA8Q9Y5G5 932 aa10.74□□□□□ -0.69
VPS18-201ENST00000220509 LRRC37AA6NMS7 1700 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 PTPRJQ12913 1337 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 HNRNPCL1O60812 293 aaKnown RBP10.73□□□□□ -0.69
VPS18-201ENST00000220509 CBFA2T3O75081 653 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 LRCH4O75427 683 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 INMTO95050 263 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 CD48P09326 243 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 CLK3P49761 638 aaKnown RBP10.73□□□□□ -0.69
VPS18-201ENST00000220509 SLC12A1Q13621 1099 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 MGAT5BQ3V5L5 792 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 TMPRSS6Q8IU80 811 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 COLGALT1Q8NBJ5 622 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 E2F7Q96AV8 911 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 SEPT5Q99719 369 aaPredicted RBP10.73□□□□□ -0.69
VPS18-201ENST00000220509 MRPL45Q9BRJ2 306 aaKnown RBP10.73□□□□□ -0.69
VPS18-201ENST00000220509 TRPV6Q9H1D0 765 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 EHD1Q9H4M9 534 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 EMC3Q9P0I2 261 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 SYCE1LA8MT33 242 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 CLDN5O00501 218 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 ICMTO60725 284 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 FGFR1P11362 822 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 TCF4P15884 667 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 PAMP19021 973 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 RCVRNP35243 200 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 CDK7P50613 346 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 ZNF143P52747 638 aaPredicted RBP10.73□□□□□ -0.69
VPS18-201ENST00000220509 THOP1P52888 689 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 CRADDP78560 199 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 DLG1Q12959 904 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 PDK3Q15120 406 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 BCL2A1Q16548 175 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 FSCN1Q16658 493 aaKnown RBP10.73□□□□□ -0.69
VPS18-201ENST00000220509 LRRC38Q5VT99 294 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 DEFB107AQ8IZN7 70 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 ALLCQ8N6M5 410 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 ENDOVQ8N8Q3 282 aaKnown RBP10.73□□□□□ -0.69
VPS18-201ENST00000220509 PPWD1Q96BP3 646 aaKnown RBP10.73□□□□□ -0.69
VPS18-201ENST00000220509 RNF38Q9H0F5 515 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 PPCSQ9HAB8 311 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 DTNAQ9Y4J8 743 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 AVILO75366 819 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 USP10Q14694 798 aaKnown RBP10.73□□□□□ -0.69
VPS18-201ENST00000220509 TAF5Q15542 800 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 RALGPS1Q5JS13 557 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 C1orf220Q5T0J3 134 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 KRT80Q6KB66 452 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 C4orf22Q6V702 233 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 BBS12Q6ZW61 710 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 PIGZQ86VD9 579 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 SLC26A11Q86WA9 606 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 SGF29Q96ES7 293 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 IFT43Q96FT9 208 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 PCYT2Q99447 389 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 Q9H521 79 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 FAIMQ9NVQ4 179 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 HSFX1Q9UBD0 423 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 SLC24A2Q9UI40 661 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 MID2Q9UJV3 735 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 SLC39A10Q9ULF5 831 aa10.73□□□□□ -0.69
VPS18-201ENST00000220509 CYP1A1P04798 512 aaPredicted RBP10.72□□□□□ -0.69
VPS18-201ENST00000220509 C16orf72Q14CZ0 275 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 TRMT5Q32P41 509 aaKnown RBP10.72□□□□□ -0.69
VPS18-201ENST00000220509 TXNRD3NBQ6F5E7 133 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 ZNF600Q6ZNG1 722 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 CAND1Q86VP6 1230 aaKnown RBP10.72□□□□□ -0.69
VPS18-201ENST00000220509 NDRG1Q92597 394 aaKnown RBP10.72□□□□□ -0.69
VPS18-201ENST00000220509 LPPQ93052 612 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 GLT1D1Q96MS3 346 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 FRMD8P1Q9BZ68 369 aaPredicted RBP10.72□□□□□ -0.69
VPS18-201ENST00000220509 GPR88Q9GZN0 384 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 CAAP1Q9H8G2 361 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 LIN28AQ9H9Z2 209 aaKnown RBP10.72□□□□□ -0.69
VPS18-201ENST00000220509 TBCCD1Q9NVR7 557 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 SLC7A8Q9UHI5 535 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 ADAMTS5Q9UNA0 930 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 NRCAMQ92823 1304 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 TRUB2O95900 331 aaKnown RBP10.72□□□□□ -0.69
VPS18-201ENST00000220509 TPH1P17752 444 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 TGM2P21980 687 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 MAPK10P53779 464 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 CD83Q01151 205 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 BST1Q10588 318 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 ART3Q13508 389 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 C16orf46Q6P387 395 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 KIAA2013Q8IYS2 634 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 ATP6V1E2Q96A05 226 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 SENP8Q96LD8 212 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 PPP1R10Q96QC0 940 aaKnown RBP10.72□□□□□ -0.69
VPS18-201ENST00000220509 CIB1Q99828 191 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 ULBP1Q9BZM6 244 aa10.72□□□□□ -0.69
VPS18-201ENST00000220509 KIAA1522Q9P206 1035 aaPredicted RBP10.72□□□□□ -0.69
VPS18-201ENST00000220509 PRRC2BQ5JSZ5 2229 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms