RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 RP9Q8TA86 221 aaKnown RBP17.56■□□□□ 0.4
USB1-201ENST00000219281 RCN3Q96D15 328 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 CATSPER2Q96P56 530 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 APBA2Q99767 749 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 C1QTNF1Q9BXJ1 281 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 MID2Q9UJV3 735 aa17.56■□□□□ 0.4
USB1-201ENST00000219281 RUVBL2Q9Y230 463 aaKnown RBP17.56■□□□□ 0.4
USB1-201ENST00000219281 A0A1B0GVG6 124 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 PTPN1P18031 435 aaKnown RBP17.55■□□□□ 0.4
USB1-201ENST00000219281 XRCC1P18887 633 aaPredicted RBP17.55■□□□□ 0.4
USB1-201ENST00000219281 PNPLA4P41247 253 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 PKNOX1P55347 436 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 DYNC1I2Q13409 638 aaKnown RBP17.55■□□□□ 0.4
USB1-201ENST00000219281 FLOT2Q14254 428 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 ZNF423Q2M1K9 1284 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 SV2CQ496J9 727 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 OLFML2BQ68BL8 750 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 NXNQ6DKJ4 435 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 LIMS2Q7Z4I7 341 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 NAT14Q8WUY8 206 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 USP13Q92995 863 aaPredicted RBP17.55■□□□□ 0.4
USB1-201ENST00000219281 MARK4Q96L34 752 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 SNX10Q9Y5X0 201 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 SLC4A7Q9Y6M7 1214 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 RRN3P2A6NIE6 340 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 PGM3O95394 542 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 APOA4P06727 396 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 SMIM10L2AP0DMW4 78 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 SMIM10L2BP0DMW5 78 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 SEMA3BQ13214 749 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 USP10Q14694 798 aaKnown RBP17.55■□□□□ 0.4
USB1-201ENST00000219281 ISLR2Q6UXK2 745 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 RNF148Q8N7C7 305 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 PIP4K2CQ8TBX8 421 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 KCTD4Q8WVF5 259 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 KCTD13Q8WZ19 329 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 LRGUKQ96M69 825 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 TSNARE1Q96NA8 513 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 GPR22Q99680 433 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 ULBP1Q9BZM6 244 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 IL22Q9GZX6 179 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 WDR6Q9NNW5 1121 aaKnown RBP17.55■□□□□ 0.4
USB1-201ENST00000219281 VCX3AQ9NNX9 186 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 ETAA1Q9NY74 926 aa17.55■□□□□ 0.4
USB1-201ENST00000219281 PIN4Q9Y237 131 aaKnown RBP17.55■□□□□ 0.4
USB1-201ENST00000219281 NRCAMQ92823 1304 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 RALGAPA2Q2PPJ7 1873 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 YJEFN3A6XGL0 299 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 ERI2A8K979 691 aaKnown RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 NCAM2O15394 837 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 F2P00734 622 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 JUNP05412 331 aaKnown RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 ZNF865P0CJ78 1059 aaPredicted RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 ENO3P13929 434 aaPredicted RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 WARSP23381 471 aaKnown RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 PPARGP37231 505 aaPredicted RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 ATXN3P54252 364 aaPredicted RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 LILRA4P59901 499 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 PIGGQ5H8A4 983 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 ITPRIPL1Q6GPH6 555 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 ZC3HC1Q86WB0 502 aaKnown RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 CPSF7Q8N684 471 aaKnown RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 ANKRD6Q9Y2G4 727 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 RAD54BQ9Y620 910 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 COMMD3-BMI1R4GMX3 469 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 DENRO43583 198 aaKnown RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 OR6B1O95007 311 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 JCHAINP01591 159 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 DARSP14868 501 aaKnown RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 PMLP29590 882 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 MS4A2Q01362 244 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 PRKAA1Q13131 559 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 MAP2K5Q13163 448 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 CNGA3Q16281 694 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 CCL14Q16627 93 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 CTU1Q7Z7A3 348 aaKnown RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 RDH11Q8TC12 318 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 HAPLN3Q96S86 360 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 SLC9A7Q96T83 725 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 COPS7BQ9H9Q2 264 aaPredicted RBP17.54■□□□□ 0.4
USB1-201ENST00000219281 UBAP1Q9NZ09 502 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 FBXW11Q9UKB1 542 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 TRHDEQ9UKU6 1024 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 CDYLQ9Y232 598 aa17.54■□□□□ 0.4
USB1-201ENST00000219281 MBLAC1A4D2B0 266 aaPredicted RBP17.53■□□□□ 0.4
USB1-201ENST00000219281 AP1G1O43747 822 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 DNAJA2O60884 412 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 CABYRO75952 493 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 IGFBP6P24592 240 aaPredicted RBP17.53■□□□□ 0.4
USB1-201ENST00000219281 CSRP3P50461 194 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 CEACAM7Q14002 265 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 WSCD1Q658N2 575 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 SLC41A1Q8IVJ1 513 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 LSMEM2Q8N112 164 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 FSTL5Q8N475 847 aaPredicted RBP17.53■□□□□ 0.4
USB1-201ENST00000219281 MARVELD2Q8N4S9 558 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 NTAN1Q96AB6 310 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 HDAC11Q96DB2 347 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 ZNF385DQ9H6B1 395 aa17.53■□□□□ 0.4
USB1-201ENST00000219281 ANKRD33BA6NCL7 494 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms