RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ARL15Q9NXU5 204 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 ALKBH4Q9NXW9 302 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 LIMD1Q9UGP4 676 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 WNT6Q9Y6F9 365 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 FPGTO14772 594 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 FGRP09769 529 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 MTFMTQ96DP5 389 aaKnown RBP13.94□□□□□ -0.18
SIX4-201ENST00000216513 NRBF2Q96F24 287 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 SIPA1Q96FS4 1042 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 ASF1AQ9Y294 204 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 ZNF142P52746 1687 aaPredicted RBP13.94□□□□□ -0.18
SIX4-201ENST00000216513 WDR27A2RRH5 827 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 ANKDD1BA6NHY2 528 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 RAD51BO15315 384 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 DAB1O75553 588 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 LYPLA2O95372 231 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 HSD17B3P37058 310 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 ANXA11P50995 505 aaKnown RBP13.94□□□□□ -0.18
SIX4-201ENST00000216513 MAPRE2Q15555 327 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 AP1ARQ63HQ0 302 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 TXNDC8Q6A555 127 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 FAM151BQ6UXP7 276 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 REXO1L1PQ8IX06 675 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 ZIC5Q96T25 663 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.94□□□□□ -0.18
SIX4-201ENST00000216513 SAGE1Q9NXZ1 904 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 NOP53Q9NZM5 478 aaKnown RBP13.94□□□□□ -0.18
SIX4-201ENST00000216513 CDYLQ9Y232 598 aa13.94□□□□□ -0.18
SIX4-201ENST00000216513 IGKV6D-41A0A0C4DH26 115 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 NR2C2P49116 596 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 ILF3Q12906 894 aaKnown RBP eCLIP13.93□□□□□ -0.18
SIX4-201ENST00000216513 GALNT13Q8IUC8 556 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 C2orf15Q8WU43 125 aaKnown RBP13.93□□□□□ -0.18
SIX4-201ENST00000216513 ACDQ96AP0 544 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 MYO19Q96H55 970 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 BBS4Q96RK4 519 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 ACTR5Q9H9F9 607 aaPredicted RBP13.93□□□□□ -0.18
SIX4-201ENST00000216513 HPSEQ9Y251 543 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 TRIM49D1C9J1S8 452 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 SMAPO00193 183 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 CNSTQ6PJW8 725 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 NPNTQ6UXI9 565 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 RIN3Q8TB24 985 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 TUBGCP3Q96CW5 907 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 CD248Q9HCU0 757 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 ASB3Q9Y575 518 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 BMP10O95393 424 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 ELP6Q0PNE2 266 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 PHF19Q5T6S3 580 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 C16orf87Q6PH81 154 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 FBXL16Q8N461 479 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 C2orf73Q8N5S3 287 aaPredicted RBP13.93□□□□□ -0.18
SIX4-201ENST00000216513 HDAC7Q8WUI4 952 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 SEC16BQ96JE7 1060 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 ZMYM5Q9UJ78 669 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 DOT1LQ8TEK3 1739 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 EVPLLA8MZ36 301 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 MPP3Q13368 585 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 NSUN3Q9H649 340 aaKnown RBP13.93□□□□□ -0.18
SIX4-201ENST00000216513 BANF1O75531 89 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 CATP04040 527 aaKnown RBP13.93□□□□□ -0.18
SIX4-201ENST00000216513 ETS1P14921 441 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 GOT1P17174 413 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 FLOT2Q14254 428 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 LEMD2Q8NC56 503 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 FAM162AQ96A26 154 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 TAS2R13Q9NYV9 303 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 SH3BP4Q9P0V3 963 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 DNPEPQ9ULA0 475 aa13.93□□□□□ -0.18
SIX4-201ENST00000216513 SERPINB8P50452 374 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 KCNK10P57789 538 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 IRGCQ6NXR0 463 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 SNRNP25Q9BV90 132 aaKnown RBP13.92□□□□□ -0.18
SIX4-201ENST00000216513 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.92□□□□□ -0.18
SIX4-201ENST00000216513 GRID1Q9ULK0 1009 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 BTN3A1O00481 513 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 ACSL4O60488 711 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 SLC16A1P53985 500 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 IL17AQ16552 155 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 NLRP9Q7RTR0 991 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 EFL1Q7Z2Z2 1120 aaKnown RBP13.92□□□□□ -0.18
SIX4-201ENST00000216513 NAF1Q96HR8 494 aaKnown RBP13.92□□□□□ -0.18
SIX4-201ENST00000216513 ZNF333Q96JL9 665 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 TIMM44O43615 452 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 MATKP42679 507 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 DMC1Q14565 340 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 ZNF384Q8TF68 577 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 CYB5D2Q8WUJ1 264 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 KCNK16Q96T55 309 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 BCAS3Q9H6U6 928 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 SFXN1Q9H9B4 322 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 L1RE1Q9UN81 338 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 FCF1Q9Y324 198 aaKnown RBP13.92□□□□□ -0.18
SIX4-201ENST00000216513 HOXB2P14652 356 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 LMO2P25791 158 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 LRRC73Q5JTD7 316 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 TMEM164Q5U3C3 297 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 MFSD5Q6N075 450 aa13.92□□□□□ -0.18
SIX4-201ENST00000216513 C16orf46Q6P387 395 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms