RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CD300LGQ6UXG3 332 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 MAVSQ7Z434 540 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 CASP10Q92851 521 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 IFT43Q96FT9 208 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 GBA3Q9H227 469 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 ZFYVE28Q9HCC9 887 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 S100A14Q9HCY8 104 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 DMAP1Q9NPF5 467 aaPredicted RBP13.35□□□□□ -0.27
CTNS-201ENST00000046640 DCDC2Q9UHG0 476 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 PRG3Q9Y2Y8 225 aaPredicted RBP13.35□□□□□ -0.27
CTNS-201ENST00000046640 Q9Y3F1 56 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 PTCH2Q9Y6C5 1203 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 MKI67P46013 3256 aaKnown RBP13.35□□□□□ -0.27
CTNS-201ENST00000046640 TTC24A2A3L6 582 aaPredicted RBP13.35□□□□□ -0.27
CTNS-201ENST00000046640 F8W8V4 182 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 NEMP1O14524 444 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 PAGE1O75459 146 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 RALBP11234 206 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 CPA3P15088 417 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 CNTFP26441 200 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 COPAP53621 1224 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 SLC5A3P53794 718 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 GALNT2Q10471 571 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 SCAPQ12770 1279 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 CBLBQ13191 982 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 CTBP1Q13363 440 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 PCSK7Q16549 785 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 DDR2Q16832 855 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 SPANXN3Q5MJ09 141 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 BTBD8Q5XKL5 378 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 ZNF280BQ86YH2 543 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 RNF148Q8N7C7 305 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 B3GALT6Q96L58 329 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 TEKT5Q96M29 485 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 TSPAN18Q96SJ8 248 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 RBBP8Q99708 897 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 SPC25Q9HBM1 224 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 COPG2Q9UBF2 871 aa13.35□□□□□ -0.27
CTNS-201ENST00000046640 BIRC5O15392 142 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 F9P00740 461 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 MX2P20592 715 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 DLG1Q12959 904 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 MPP3Q13368 585 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 LPIN1Q14693 890 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 SLC39A12Q504Y0 691 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 RABGAP1LQ5R372 815 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 PDPK2PQ6A1A2 396 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 NAPRTQ6XQN6 538 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 TFAP2DQ7Z6R9 452 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 DENND6AQ8IWF6 608 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 PPP4R1Q8TF05 950 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 SOCS4Q8WXH5 440 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 FCRL2Q96LA5 508 aaPredicted RBP13.34□□□□□ -0.27
CTNS-201ENST00000046640 CPNE1Q99829 537 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 NAT9Q9BTE0 207 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 FTHL17Q9BXU8 183 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 NMUR1Q9HB89 426 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 CASS4Q9NQ75 786 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 MKS1Q9NXB0 559 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 C9IYK1 514 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 SOAT2O75908 522 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 PGM3O95394 542 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 C2P06681 752 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 RAG1P15918 1043 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 SPRP35270 261 aaPredicted RBP13.34□□□□□ -0.27
CTNS-201ENST00000046640 CHRNA4P43681 627 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 IDH3AP50213 366 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 ARPP19P56211 112 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 GJA9P57773 515 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 CAP1Q01518 475 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 CNPY1Q3B7I2 92 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 KCTD11Q693B1 232 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 FRMD7Q6ZUT3 714 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 CYS1Q717R9 158 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 TMEM135Q86UB9 458 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 SPATA2LQ8IUW3 424 aaPredicted RBP13.34□□□□□ -0.27
CTNS-201ENST00000046640 MFN1Q8IWA4 741 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 OR6Y1Q8NGX8 325 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 RSPH1Q8WYR4 309 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 HDAC11Q96DB2 347 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 GCNAQ96QF7 691 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 ACBD6Q9BR61 282 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 SLC2A6Q9UGQ3 507 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 SF3B1O75533 1304 aaKnown RBP eCLIP13.34□□□□□ -0.274e-12■■■■■ 275.7
CTNS-201ENST00000046640 AIM2O14862 343 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 VAPBO95292 243 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 CYBAP13498 195 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 GRK4P32298 578 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 RPL9P32969 192 aaKnown RBP13.34□□□□□ -0.27
CTNS-201ENST00000046640 SERPINB5P36952 375 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 PRKCZQ05513 592 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 TUBB3Q13509 450 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 CCNIQ14094 377 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 GRM3Q14832 879 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 GRTP1Q5TC63 336 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 RGMBQ6NW40 437 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 DHDDSQ86SQ9 333 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 C14orf80Q86SX3 495 aa13.34□□□□□ -0.27
CTNS-201ENST00000046640 SAPCD2Q86UD0 394 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms