RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Pik3r2O08908 722 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Alas2P08680 587 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Prl3b1P09586 222 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Vgll3P85442 326 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Tespa1Q3U132 458 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Cyp2c66Q5GLZ0 490 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Grik1Q60934 836 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Cntn4Q69Z26 1026 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Ston2Q8BZ60 895 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Tlk1Q8C0V0 766 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Gfm2Q8R2Q4 779 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Myoz3Q8R4E4 245 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Znrf4Q9DAH2 327 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Tlr9Q9EQU3 1032 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Trpc4Q9QUQ5 974 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 PigqQ9QYT7 581 aa28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 H2afyQ9QZQ8 372 aaKnown RBP28.27■■■□□ 2.12
Ldb1-208ENSMUST00000185355 Usp51B1AY15 661 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Tada2bD3Z4Z0 420 aaKnown RBP28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Adamts14E9PX39 1209 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 PrlrQ08501 608 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Gspt2Q149F3 632 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Cyb5r2Q3KNK3 276 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Trmt10cQ3UFY8 414 aaKnown RBP28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Marveld2Q3UZP0 555 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 PapolaQ61183 739 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Lcp1Q61233 627 aaKnown RBP28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Dpy19l3Q71B07 716 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Rbm22Q8BHS3 420 aaKnown RBP28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Smoc2Q8CD91 447 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Acvr1cQ8K348 493 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Ttc39cQ8VE09 580 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Barhl2Q8VIB5 384 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Tcaf2Q921K8 919 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Tmed5Q9CXE7 229 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Fgf22Q9ESS2 162 aa28.26■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Gm3259D3YUK0 475 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Pate1E9Q658 125 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Spata31E9QAF0 1014 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Olfr1022L7MTT3 315 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Klf6O08584 283 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 P01673 111 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 PdgfrbP05622 1098 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Gm8773Q3UQ24 132 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Cyp4f37Q3V1F1 546 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Myo1gQ5SUA5 1024 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Clec1aQ8BWY2 269 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Trim7Q923T7 510 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Txndc12Q9CQU0 170 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Pak1ip1Q9DCE5 382 aaKnown RBP28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Grm3Q9QYS2 879 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Sept6Q9R1T4 434 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Pdpk1Q9Z2A0 559 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Gm20721E9Q2U8 318 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Scd1P13516 355 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Kcna3P16390 528 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Fen1P39749 378 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Kir3dl1P83555 432 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Fam83fQ3UKU4 495 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Olfr464Q5SW48 313 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Capn11Q6J756 714 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Maml1Q6T264 1020 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Olfr20Q7TRX9 314 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Dnajc6Q80TZ3 938 aa28.25■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Myo18aQ9JMH9 2050 aaKnown RBP28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 4930469K13RikA0A286YDB2 92 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Olfr603L7N1Y4 312 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Fpr-rs3O88537 343 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Cd247P24161 164 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Atp6v0d1P51863 351 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Grb10Q60760 621 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Tbc1d10bQ8BHL3 798 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Ticam2Q8BJQ4 232 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Tmem74Q8BQU7 305 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Mpp7Q8BVD5 576 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Nsmce1Q9D720 266 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Cab39lQ9DB16 337 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Homer2Q9QWW1 354 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 AadatQ9WVM8 425 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 M1apQ9Z0E1 529 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Fkbp1bQ9Z2I2 108 aa28.24■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Kctd18E0CZ26 429 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Tekt5G5E8A8 557 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Rpl36P47964 105 aaKnown RBP28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Syce2Q505B8 171 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Heatr9Q5QNV8 569 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Metap1Q8BP48 386 aaKnown RBP28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Plin5Q8BVZ1 463 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Tbc1d17Q8BYH7 645 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Klhl2Q8JZP3 593 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Dhx36Q8VHK9 1001 aaKnown RBP28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Aco2Q99KI0 780 aaKnown RBP28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Tmbim4Q9DA39 238 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Pi16Q9ET66 489 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Wdr46Q9Z0H1 622 aaKnown RBP28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Tbkbp1A2A9T0 611 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 PtproE9Q612 1226 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Cdh16O88338 830 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Ctbp1O88712 441 aa28.23■■■□□ 2.11
Ldb1-208ENSMUST00000185355 Slc26a1P58735 704 aa28.23■■■□□ 2.11
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms