RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 AtripQ8BMG1 785 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Pcyox1lQ8C7K6 495 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Snx30Q8CE50 437 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Tmem259Q8CIV2 574 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Stard13Q923Q2 1113 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Cldnd1Q9CQX5 253 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Efcab9Q9DAM2 216 aa21.56■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Maml3D4QGC2 1135 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Zfp597E9Q6S0 419 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Pik3cdO35904 1043 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Limk2O54785 638 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Chrna4O70174 629 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 AfpP02772 605 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 LifP09056 203 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Tap1P21958 724 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 PenkP22005 268 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Kif5cP28738 956 aaKnown RBP21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Lig3P97386 1015 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Mc1rQ01727 315 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 DhpsQ3TXU5 369 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Agap2Q3UHD9 1186 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Trim24Q64127 1051 aaKnown RBP21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 PtprcapQ64697 197 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Krba1Q6NXZ1 1043 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 TwistnbQ78WZ7 330 aaKnown RBP21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Zic5Q7TQ40 622 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Zfp454Q80Y34 536 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Epb41l5Q8BGS1 731 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Plekhs1Q8BW88 474 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Pnpt1Q8K1R3 783 aaKnown RBP21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Olfr784Q8VFZ9 319 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 DdoQ922Z0 341 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Klhdc8bQ9D2D9 354 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Atp6v1e2Q9D593 226 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Lilra6A0A0B4J1F3 663 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Card9A2AIV8 536 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ccdc24E9PUW8 296 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Tcp10cE9Q046 482 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Morc3F7BJB9 942 aaKnown RBP21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Vmn1r176G3UW31 304 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 PrkcshO08795 521 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ifnar2O35664 513 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 CrymO54983 313 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 mt-Co3P00416 261 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Gna12P27600 379 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Pitx1P70314 315 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ncf4P97369 339 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Slc24a2Q14BI1 711 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Znf148Q61624 794 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Phc1Q64028 1012 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ankrd6Q69ZU8 712 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Dnajc15Q78YY6 149 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 SrlQ7TQ48 910 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ccnt2Q7TQK0 723 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Msantd1Q8BIL2 278 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Zfp719Q8BIV1 735 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Mterf2Q8BKY8 385 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Fam204aQ8C6C7 236 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Mtrf1Q8K126 446 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Tmem82Q8R115 356 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Elmod3Q91YP6 381 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 KynuQ9CXF0 464 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Mfsd10Q9D2V8 456 aaKnown RBP21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Tlr9Q9EQU3 1032 aa21.55■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Trbv4A0A075B5I2 113 aa21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 P01641 117 aa21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Cyb5r4Q3TDX8 528 aa21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Prkaa1Q5EG47 559 aa21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Rxfp4Q7TQP4 414 aa21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Fzd10Q8BKG4 582 aa21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Mtnr1bQ8CIQ6 364 aa21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ecrg4Q99LS0 148 aa21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Slc22a17Q9D9E0 401 aa21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Mpp6Q9JLB0 553 aa21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 MylkQ6PDN3 1941 aaKnown RBP21.54■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ect2lA0A140LIP2 953 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Il13ra1O09030 424 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Exoc7O35250 697 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ap3d1O54774 1199 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Mmp13P33435 472 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 GemP55041 295 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ptprn2P80560 1001 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 RhocQ62159 193 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Gpr17Q6NS65 339 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ppp2r2aQ6P1F6 447 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Tarsl2Q8BLY2 790 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 C5ar2Q8BW93 344 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Pitrm1Q8K411 1036 aaKnown RBP21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Fam173bQ9D1Z3 247 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Trip4Q9QXN3 581 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Asb3Q9WV72 525 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 HephQ9Z0Z4 1157 aa21.53■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Anxa8O35640 327 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Ddx6P54823 483 aaKnown RBP21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Spire1Q52KF3 598 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Taok1Q5F2E8 1001 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Nab1Q61122 486 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Olfr1080Q7TR67 313 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Fstl5Q8BFR2 847 aa21.52■■□□□ 1.04
Ccdc88a-202ENSMUST00000109477 Slc18a2Q8BRU6 517 aa21.52■■□□□ 1.04
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms