RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gna12P27600 379 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Il12bP43432 335 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cav1P49817 178 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gabpb1Q00420 383 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cd300lgQ1ERP8 331 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Atxn7l3bQ3UD01 97 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sult1d1Q3UZZ6 295 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 LpoQ5SW46 710 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mpp7Q8BVD5 576 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Samd7Q8C8Y5 445 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Tmem82Q8R115 356 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Lrrc14Q8VC16 493 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Zdhhc12Q8VC90 267 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Alg9Q8VDI9 611 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Olfr589Q8VGV8 317 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ndufa10Q99LC3 355 aaKnown RBP8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Spc24Q9D083 201 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Exoc2Q9D4H1 924 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Q9D937 123 aaKnown RBP8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Asap1Q9QWY8 1147 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Adam17Q9Z0F8 827 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Stau1Q9Z108 487 aaKnown RBP8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gm6370A0A0G2JGX9 315 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 4930444G20RikD3Z741 495 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Vmn1r176G3UW31 304 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 1700122O11RikJ3QPW6 241 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gm6309L7N481 315 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Clcn6O35454 870 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 CrymO54983 313 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gm5571P01639 130 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ankzf1Q80UU1 748 aaKnown RBP8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fzd10Q8BKG4 582 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Slc18a2Q8BRU6 517 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rccd1Q8BTU7 377 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Haus3Q8QZX2 570 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Asz1Q8VD46 475 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 KynuQ9CXF0 464 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Vps28Q9D1C8 221 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Grb14Q9JLM9 538 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 C1qtnf1Q9QXP7 281 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Chrna6Q9R0W9 494 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 PrebQ9WUQ2 417 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Elf4Q9Z2U4 655 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 Vmn2r25W4VSP2 855 aa8.86□□□□□ -0.99
Trim39-201ENSMUST00000042717 1110002E22RikE0CYV9 1786 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Acnat1A2AKK5 416 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Serpine3E9Q6A2 401 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Usp35M0QWN7 1009 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Bmpr2O35607 1038 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 DcxO88809 366 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 AfpP02772 605 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Got2P05202 430 aaKnown RBP8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ap2a1P17426 977 aaKnown RBP8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 VdrP48281 422 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ndst2P52850 883 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cdh6P97326 790 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 AurkaP97477 395 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Foxr1Q3UTB7 268 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Foxj1Q61660 421 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Lemd2Q6DVA0 511 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Zfp759Q7M6X3 721 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Mettl21cQ8BLU2 248 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ano4Q8C5H1 955 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Defb36Q8K3U4 67 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 RhoqQ8R527 205 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Slc35f6Q8VE96 372 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Msi2Q920Q6 346 aaKnown RBP8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Adi1Q99JT9 179 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Golga1Q9CW79 758 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Myo10F8VQB6 2062 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Patl2A2ARM1 529 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cilp2D3Z7H8 1162 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ifnar2O35664 513 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 P01641 117 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 DesP31001 469 aaKnown RBP8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Wee1P47810 646 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 InhbaQ04998 424 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cd244Q07763 397 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Rtel1Q0VGM9 1203 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 McuQ3UMR5 350 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Gpr65Q61038 337 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Pwwp2aQ69Z61 730 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Dclk2Q6PGN3 756 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Efr3bQ6ZQ18 817 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Clec4a3Q8JZX6 237 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ints9Q8K114 658 aaKnown RBP8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Appl1Q8K3H0 707 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Nup85Q8R480 656 aaKnown RBP8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Pcdhb13Q91Y06 796 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Hddc3Q9D114 179 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 DtnaQ9D2N4 746 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Spata9Q9D9R3 252 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Fzd2Q9JIP6 570 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sept6Q9R1T4 434 aa8.85□□□□□ -0.99
Trim39-201ENSMUST00000042717 Lilra6A0A0B4J1F3 663 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Serpinb3cA2RSF9 386 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Ttll11A4Q9F4 727 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Cd2P08920 344 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 Sbk3P0C5K0 361 aa8.84□□□□□ -0.99
Trim39-201ENSMUST00000042717 SpnP15702 395 aa8.84□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms