RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Kpna3O35344 521 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Hesx1Q61658 185 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Prl3a1Q78Y73 227 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Epn2Q8CHU3 595 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ago1Q8CJG1 857 aaKnown RBP12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 HnrnplQ8R081 586 aaKnown RBP12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Creld1Q91XD7 420 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gpn3Q9D3W4 284 aa12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Drg2Q9QXB9 364 aaKnown RBP12.05□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gm13089A2AGW7 455 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Vmn2r70K7N702 854 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 VwdeQ6DFV8 926 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cpa4Q6P8K8 420 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 PdgfrlQ6PE55 375 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gabra5Q8BHJ7 463 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Q8BHN7 327 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Znf879Q8BI99 563 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Vps11Q91W86 941 aaKnown RBP12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Lpgat1Q91YX5 370 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mzb1Q9D8I1 188 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nif3l1Q9EQ80 376 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Kpna7C0LLJ0 499 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ptpn9O35239 593 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 AcadmP45952 421 aaKnown RBP12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Abl2Q4JIM5 1182 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Thoc5Q8BKT7 683 aaKnown RBP12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 LzicQ8K3C3 190 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Adam32Q8K410 754 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Slf1Q8R3P9 1054 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Dtnbp1Q91WZ8 352 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fis1Q9CQ92 152 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 IgtpQ9DCE9 423 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 TfebQ9R210 475 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gm3383J3QQ59 259 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Cd247P24161 164 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 CcnjlQ5SRT8 387 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Zfp719Q8BIV1 735 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 PstkQ8BP74 359 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 PreplQ8C167 725 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mettl3Q8C3P7 580 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Slc47a1Q8K0H1 567 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Setd7Q8VHL1 366 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nudt8Q9CR24 210 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ilf2Q9CXY6 390 aaKnown RBP12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Rnf25Q9QZR0 456 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Fam171a2A2A699 822 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ifi213D3Z5G0 586 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 1700011I03RikE9PYL8 271 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Folh1O35409 752 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ppef1O35655 650 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 AcrP23578 436 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Tbxas1P36423 533 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Sash1P59808 1230 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Vwa2Q70UZ7 791 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Creb3l2Q8BH52 521 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 BoraQ8BS90 525 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Asz1Q8VD46 475 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pcdha5Q91Y15 934 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Oas1cQ924S2 362 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Txndc12Q9CQU0 170 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Satl1Q9D5N8 744 aa12.04□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gm4924A0A1B0GR71 966 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Trmt1lA2RSY6 728 aaKnown RBP12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ccdc62E9PVD1 701 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Slc22a2O70577 553 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 MaptP10637 733 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Il1rl1P14719 567 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Shmt1P50431 478 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ctps1P70698 591 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Pld5Q3UNN8 536 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Rmdn2Q8BSE0 410 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Trmt10aQ8C1Z8 328 aaKnown RBP12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Zbtb8bQ8CII0 484 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Etv3Q8R4Z4 513 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Commd8Q9CZG3 183 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Det1Q9D0A0 550 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Efcab9Q9DAM2 216 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mta2Q9R190 668 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nckap1P28660 1128 aaKnown RBP12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 ThraP63058 492 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Mapk1P63085 358 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 AxlQ00993 888 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Znf865Q3U3I9 1058 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Prickle1Q3U5C7 832 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Xlr3cQ61806 226 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Stx5Q8K1E0 355 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Art3Q8R2G4 371 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 BrafP28028 804 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Msr1P30204 458 aaKnown RBP12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ckap2lQ7TS74 745 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Osbpl6Q8BXR9 959 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Slc44a2Q8BY89 706 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gpat3Q8C0N2 438 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Slc35f5Q8R314 524 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 PrccQ9EQC8 491 aaKnown RBP12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Irs2P81122 1321 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Nhsl1Q8CAF4 1587 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Bclaf3A2AG58 752 aaKnown RBP12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Gm8926L7MUE8 181 aa12.03□□□□□ -0.48
Pcif1-201ENSMUST00000041643 Ptp4a2O70274 167 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms