RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Gm3371F7CQW8 167 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Sclt1G5E861 688 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 H2afxP27661 143 aaKnown RBP17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Psmb7P70195 277 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 4930438A08RikQ5SPH3 536 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 MmeQ61391 750 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Krt15Q61414 452 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Drd1Q61616 446 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Fam167aQ6P1G6 215 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Tmc6Q7TN60 810 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 AA792892Q8C6S1 278 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Mrps18cQ8R2L5 143 aaKnown RBP17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Smim14Q91VT8 99 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Serbp1Q9CY58 407 aaKnown RBP17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Strn3Q9ERG2 796 aa17.28■□□□□ 0.36
Trim54-201ENSMUST00000013771 Mllt3A2AM29 569 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Usp51B1AY15 661 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Wnt1P04426 370 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Cdx2P43241 311 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ppp2cbP62715 309 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ppp2caP63330 309 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Tubb5P99024 444 aaKnown RBP17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Tmem184cQ3TPR7 525 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Znhit6Q3UFB2 460 aaKnown RBP17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Cfhr2Q4LDF6 332 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Mc2rQ64326 296 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 H2-M10.2Q85ZW9 329 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gcfc2Q8BKT3 769 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Arrb1Q8BWG8 418 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 PdxkQ8K183 312 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Rbmx2Q8R0F5 326 aaKnown RBP17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Eif4a3Q91VC3 411 aaKnown RBP17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Rrp1bQ91YK2 724 aaKnown RBP17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Uap1Q91YN5 522 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Tfap2dQ91ZK0 452 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Znrf4Q9DAH2 327 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Cldn14Q9Z0S3 239 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Krt16Q9Z2K1 469 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 Krt27Q9Z320 448 aa17.27■□□□□ 0.35
Trim54-201ENSMUST00000013771 SetxA2AKX3 2646 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Calcoco2A2A6M5 331 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gm16430A6X8J1 155 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Pafah1b1P63005 410 aaKnown RBP17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Mat2aQ3THS6 395 aaKnown RBP17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Fbxo39Q5NBU5 443 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Slc13a5Q67BT3 572 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Txndc8Q69AB2 127 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Snx31Q6P8Y7 439 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Asic3Q6X1Y6 530 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ctdp1Q7TSG2 960 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Q80Y73 168 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Iars2Q8BIJ6 1012 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Tmem132cQ8CEF9 1099 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ppp6r2Q8R3Q2 923 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gys2Q8VCB3 704 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Cbwd1Q8VEH6 393 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Erlec1Q8VEH8 483 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Olfr1176Q8VG40 315 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Srgap2Q91Z67 1071 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gpc1Q9QZF2 557 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gfpt2Q9Z2Z9 682 aa17.26■□□□□ 0.35
Trim54-201ENSMUST00000013771 Zfp952B0V2W4 504 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 C87414E9PWI7 475 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Srsf11E9Q6E5 511 aaKnown RBP17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Dnase1l3O55070 310 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Tspan6O70401 245 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Snx12O70493 165 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Mgat1P27808 447 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Nkx2-5P42582 318 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Cdc25cP48967 447 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 NeblQ0II04 452 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Zyg11bQ3UFS0 744 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Tmem232Q5K6N0 675 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Shc3Q61120 474 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Nt5eQ61503 576 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Cep70Q6IQY5 616 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 BckdhbQ6P3A8 390 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Papd7Q6PB75 542 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Methig1Q76I26 264 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Acad11Q80XL6 779 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Efl1Q8C0D5 1127 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Zc3h10Q8R205 435 aaKnown RBP17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Clptm1Q8VBZ3 664 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Calml4Q91WQ9 153 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 HnrnpllQ921F4 591 aaKnown RBP17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gtpbp3Q923K4 492 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Asic2Q925H0 512 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 1700020D05RikQ99PB1 294 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Dbndd2Q9CRD4 158 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ovca2Q9D7E3 225 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Akap8lQ9R0L7 642 aaKnown RBP17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Dpp6Q9Z218 804 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Cfap46E9Q2C0 2641 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 Kif26bQ7TNC6 2112 aa17.25■□□□□ 0.35
Trim54-201ENSMUST00000013771 A0A286YCD0 109 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Olfr1305A2AVW3 312 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Ism2D3Z6A3 493 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 Gm14496K7N5U4 849 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 IlkO55222 452 aa17.24■□□□□ 0.35
Trim54-201ENSMUST00000013771 TubP50586 505 aa17.24■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms