RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Prl2c1Q5SVL9 228 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rgl2Q61193 778 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 KdsrQ6GV12 332 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ggnbp1Q6K1E7 370 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rasa4Q6PFQ7 802 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tcaf3Q6QR59 914 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr1037Q7TR84 321 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist3h2aQ8BFU2 130 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rft1Q8C3B8 541 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2afQ8CGP5 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2ahQ8CGP6 128 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2akQ8CGP7 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 HnrnplQ8R081 586 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 H2afjQ8R1M2 129 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pbld2Q9CXN7 288 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mcemp1Q9D8U6 183 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Plscr1Q9JJ00 328 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Prg3Q9JL95 222 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rb1P13405 921 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nedd8P29595 81 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pola2P33611 600 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ythdf1P59326 559 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cdh6P97326 790 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm4951Q3UED7 406 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Scn2bQ56A07 215 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Zdhhc20Q5Y5T1 380 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Senp5Q6NXL6 749 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Znf821Q6PD05 413 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 AW551984Q8BGF0 804 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Prkag3Q8BGM7 489 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Q8BH50 245 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Il33Q8BVZ5 266 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Kiaa2013Q91X21 634 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nudt14Q9D142 222 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cul2Q9D4H8 745 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 4930524N10RikQ9D519 233 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Syvn1Q9DBY1 612 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Trip6Q9Z1Y4 480 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Klhl18A0A0G2JGN5 579 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hnrnph3D3Z3N4 346 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Bmpr2O35607 1038 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rab2aP53994 212 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cdh9P70407 786 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 SelpQ01102 768 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Klrb1Q0ZUP1 214 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Kbtbd8Q3UQV5 599 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tgoln2Q62314 363 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Plppr4Q7TME0 766 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 R3hcc1lQ8BJM3 775 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mrps35Q8BJZ4 320 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fbxo38Q8BMI0 1194 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gpr180Q8BPS4 441 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cfap61Q8CEL2 1252 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Aldh4a1Q8CHT0 562 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vmn1r206Q8R277 312 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Oxnad1Q8VE38 311 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Lgals12Q91VD1 314 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mcm8Q9CWV1 833 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mxra8Q9DBV4 442 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cyp2s1Q9DBX6 501 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fbxo16Q9QZM9 334 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Mta2Q9R190 668 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Adgra3Q7TT36 1310 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ms4a14A0A087WSD2 1232 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pramef6A2A8M8 474 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Krt83E9Q1Y9 479 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tsc22d2E9Q7M2 769 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fbxw9F8VPX2 458 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Smim22J3QP37 91 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cxcr3O88410 367 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 MycP01108 439 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 MbP04247 154 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Prdx3P20108 257 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 LeprP48356 1162 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Usp46P62069 366 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Dnajc11Q5U458 559 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gstt2Q61133 244 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Klhl6Q6V595 619 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm6377Q8BHV4 303 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Smco1Q8CEZ1 214 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vmn1r64Q8R2B8 320 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr449Q8VGW8 311 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Kdelr1Q99JH8 212 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Scd3Q99PL7 359 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Txndc12Q9CQU0 170 aa9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vps35Q9EQH3 796 aaKnown RBP9.27□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rnf17Q99MV7 1640 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Trmt1lA2RSY6 728 aaKnown RBP9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tnfrsf25B1AWN9 411 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm17333C6EQI3 125 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 AlpiF8VPQ6 554 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Barx2O08686 283 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pde8aO88502 823 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Csf1rP09581 977 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Alox5P48999 674 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fam83hQ148V8 1209 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Oog3Q3UWY1 500 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Fbxw2Q60584 422 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 EregQ61521 162 aa9.27□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Dennd5aQ6PAL8 1287 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms