RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 BRD9Q9H8M2 597 aa10.51□□□□□ -0.73
PHGDH-224ENST00000641711 SENP1Q9P0U3 644 aa10.51□□□□□ -0.73
PHGDH-224ENST00000641711 CFAP97Q9P2B7 532 aa10.51□□□□□ -0.73
PHGDH-224ENST00000641711 WNT16Q9UBV4 365 aa10.51□□□□□ -0.73
PHGDH-224ENST00000641711 XPO7Q9UIA9 1087 aaKnown RBP10.51□□□□□ -0.73
PHGDH-224ENST00000641711 CCL26Q9Y258 94 aa10.51□□□□□ -0.73
PHGDH-224ENST00000641711 EXOC1LA0A1B0GW35 172 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 TCRBV7S3A2A0A539 114 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 SLC12A8A0AV02 714 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 TMEM120BA0PK00 339 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 H3BRJ5 948 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 ARNTLO00327 626 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 KCNN4O15554 427 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 SPAG6O75602 509 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 APOEP02649 317 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 ASGR2P07307 311 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 RBL1P28749 1068 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 GDI1P31150 447 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 ARL4AP40617 200 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 HARS2P49590 506 aaKnown RBP10.5□□□□□ -0.73
PHGDH-224ENST00000641711 PGFP49763 221 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 ATXN1P54253 815 aaKnown RBP10.5□□□□□ -0.73
PHGDH-224ENST00000641711 GPX6P59796 221 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 PRKCQQ04759 706 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 SIGLEC14Q08ET2 396 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 SCAPQ12770 1279 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 EIF4EBP2Q13542 120 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-224ENST00000641711 PPP2R5DQ14738 602 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 KLHL38Q2WGJ6 581 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 MSS51Q4VC12 460 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 CCDC38Q502W7 563 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 DCAF6Q58WW2 860 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 PPP6R3Q5H9R7 873 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-224ENST00000641711 BRMS1LQ5PSV4 323 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 NCBP2-AS2Q69YL0 99 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 YTHDF3Q7Z739 585 aaKnown RBP10.5□□□□□ -0.73
PHGDH-224ENST00000641711 TAC4Q86UU9 113 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 FAM217AQ8IXS0 508 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 CCDC13Q8IYE1 715 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 CYP4X1Q8N118 509 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 CPXM2Q8N436 756 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 CPA6Q8N4T0 437 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 ZNF557Q8N988 423 aaPredicted RBP10.5□□□□□ -0.73
PHGDH-224ENST00000641711 NDRG1Q92597 394 aaKnown RBP10.5□□□□□ -0.73
PHGDH-224ENST00000641711 EDEM1Q92611 657 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 RSPRY1Q96DX4 576 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 SLC39A13Q96H72 371 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 DDX50Q9BQ39 737 aaKnown RBP10.5□□□□□ -0.73
PHGDH-224ENST00000641711 WDR83Q9BRX9 315 aaKnown RBP10.5□□□□□ -0.73
PHGDH-224ENST00000641711 ACSS3Q9H6R3 686 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 VPS37BQ9H9H4 285 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 SMPD4Q9NXE4 827 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 CTNNAL1Q9UBT7 734 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 RABGEF1Q9UJ41 708 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 STOML2Q9UJZ1 356 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 HEY1Q9Y5J3 304 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.5□□□□□ -0.73
PHGDH-224ENST00000641711 COL4A3Q01955 1670 aa10.5□□□□□ -0.73
PHGDH-224ENST00000641711 MYOFQ9NZM1 2061 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 KIAA1549LQ6ZVL6 1849 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 MIA3Q5JRA6 1907 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 TNFRSF10AO00220 468 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 PRPF4O43172 522 aaKnown RBP eCLIP10.49□□□□□ -0.73
PHGDH-224ENST00000641711 GREM1O60565 184 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 TBX18O95935 607 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 ADH1CP00326 375 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 GSTA2P09210 222 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 BRAFP15056 766 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 TPSB2P20231 275 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 CCR1P32246 355 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 EIF2DP41214 584 aaKnown RBP10.49□□□□□ -0.73
PHGDH-224ENST00000641711 HCAR3P49019 387 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 SLC11A2P49281 568 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 ZNF135P52742 658 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-224ENST00000641711 TBX4P57082 545 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 GEMIN4P57678 1058 aaKnown RBP10.49□□□□□ -0.73
PHGDH-224ENST00000641711 CORO7P57737 925 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 BASP1P80723 227 aaKnown RBP10.49□□□□□ -0.73
PHGDH-224ENST00000641711 ZXDAP98168 799 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 GBE1Q04446 702 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 GAD2Q05329 585 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 DEUP1Q05D60 604 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 SLC10A2Q12908 348 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-224ENST00000641711 PAFAH1B3Q15102 231 aaKnown RBP10.49□□□□□ -0.73
PHGDH-224ENST00000641711 TPSAB1Q15661 275 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 EML3Q32P44 896 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 ITPRIPL2Q3MIP1 535 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 C6orf89Q6UWU4 347 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 TRABD2AQ86V40 505 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 MIB1Q86YT6 1006 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 SUGP1Q8IWZ8 645 aaKnown RBP10.49□□□□□ -0.73
PHGDH-224ENST00000641711 ATP6V0D2Q8N8Y2 350 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 CSGALNACT1Q8TDX6 532 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 EDAQ92838 391 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 LRRC39Q96DD0 335 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 SHDQ96IW2 340 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 BTN2A3PQ96KV6 586 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 NECAB3Q96P71 396 aaPredicted RBP10.49□□□□□ -0.73
PHGDH-224ENST00000641711 PLA2G2FQ9BZM2 168 aa10.49□□□□□ -0.73
PHGDH-224ENST00000641711 KLC2Q9H0B6 622 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms