RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 KLF1Q13351 362 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-218ENST00000641491 PRPSAP1Q14558 356 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 STARD3Q14849 445 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 UBXN2BQ14CS0 331 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 FUT11Q495W5 492 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 FBXO43Q4G163 708 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 FSCBQ5H9T9 825 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 CFAP58Q5T655 872 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 SERPINA13PQ6UXR4 307 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 ARHGEF18Q6ZSZ5 1173 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 C12orf40Q86WS4 652 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 KLHL7Q8IXQ5 586 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 ETFBKMTQ8IXQ9 262 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.22□□□□□ -0.29
PHGDH-218ENST00000641491 CCHCR1Q8TD31 782 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 HTR3CQ8WXA8 447 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 ATG4AQ8WYN0 398 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 PPP1R2P1Q96PQ5 205 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 VAT1Q99536 393 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 FAM118BQ9BPY3 351 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 LRRC19Q9H756 370 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 NDFIP2Q9NV92 336 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 ELOVL2Q9NXB9 296 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 SAE1Q9UBE0 346 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-218ENST00000641491 WNT16Q9UBV4 365 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 VPS51Q9UID3 782 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 MUTYHQ9UIF7 546 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 MFHAS1Q9Y4C4 1052 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 DOCK6Q96HP0 2047 aa13.22□□□□□ -0.29
PHGDH-218ENST00000641491 ARNTLO00327 626 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 LIASO43766 372 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 BNIP3LO60238 219 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 SYNCRIPO60506 623 aaKnown RBP13.21□□□□□ -0.29
PHGDH-218ENST00000641491 PRAMEF11O60813 436 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 SRPRAP08240 638 aaKnown RBP13.21□□□□□ -0.29
PHGDH-218ENST00000641491 DLDP09622 509 aaKnown RBP13.21□□□□□ -0.29
PHGDH-218ENST00000641491 CA4P22748 312 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 STIP1P31948 543 aaKnown RBP13.21□□□□□ -0.29
PHGDH-218ENST00000641491 MMP13P45452 471 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 GALK1P51570 392 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 CLCN6P51797 869 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 RHOAP61586 193 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 PPIDQ08752 370 aaKnown RBP13.21□□□□□ -0.29
PHGDH-218ENST00000641491 LBRQ14739 615 aaKnown RBP13.21□□□□□ -0.29
PHGDH-218ENST00000641491 CCDC137Q6PK04 289 aaKnown RBP13.21□□□□□ -0.29
PHGDH-218ENST00000641491 MAATS1Q7Z4T9 603 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 CREG2Q8IUH2 290 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 CHPFQ8IZ52 775 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 APCDD1Q8J025 514 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 SIX5Q8N196 739 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 ATL2Q8NHH9 583 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 WFDC5Q8TCV5 224 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 NELL2Q99435 816 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 LGMNQ99538 433 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 SMARCAL1Q9NZC9 954 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 DNPEPQ9ULA0 475 aa13.21□□□□□ -0.29
PHGDH-218ENST00000641491 TECTAO75443 2155 aa13.21□□□□□ -0.3
PHGDH-218ENST00000641491 CXorf51AA0A1B0GTR3 108 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 OTOL1A6NHN0 477 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-218ENST00000641491 E7EVH7 732 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 NDC80O14777 642 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 MATN3O15232 486 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 RNASEH1O60930 286 aaKnown RBP13.2□□□□□ -0.3
PHGDH-218ENST00000641491 IGSF6O95976 241 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 ITGAVP06756 1048 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 CCNB1P14635 433 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 OPRD1P41143 372 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 MAPK8P45983 427 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 SERPINH1P50454 418 aaKnown RBP13.2□□□□□ -0.3
PHGDH-218ENST00000641491 PLK1P53350 603 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 PTPN5P54829 565 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 SNRPD1P62314 119 aaKnown RBP13.2□□□□□ -0.3
PHGDH-218ENST00000641491 ADCY2Q08462 1091 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 C2orf54Q08AI8 447 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 DHX34Q14147 1143 aaKnown RBP13.2□□□□□ -0.3
PHGDH-218ENST00000641491 GEN1Q17RS7 908 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 DGKKQ5KSL6 1271 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 AFMIDQ63HM1 303 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 C8orf74Q6P047 294 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 LINGO4Q6UY18 593 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 C4orf22Q6V702 233 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 LEKR1Q6ZMV7 388 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 BMP8AQ7Z5Y6 402 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 ARHGAP12Q8IWW6 846 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 ZNF513Q8N8E2 541 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-218ENST00000641491 NETO2Q8NC67 525 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 SPATA4Q8NEY3 305 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 USP33Q8TEY7 942 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 CHFRQ96EP1 664 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 OLFM3Q96PB7 478 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 TSGA13Q96PP4 275 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 PRRX2Q99811 253 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 CEP44Q9C0F1 390 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 POLR1EQ9GZS1 481 aaKnown RBP13.2□□□□□ -0.3
PHGDH-218ENST00000641491 RBM22Q9NW64 420 aaKnown RBP eCLIP13.2□□□□□ -0.3
PHGDH-218ENST00000641491 SUN2Q9UH99 717 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 RSPH14Q9UHP6 348 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 FBXO10Q9UK96 956 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 TRHDEQ9UKU6 1024 aa13.2□□□□□ -0.3
PHGDH-218ENST00000641491 CLEC4EQ9ULY5 219 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms