RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 THAP10Q9P2Z0 257 aaPredicted RBP22.02■■□□□ 1.12
TSPAN9-208ENST00000640568 SIT1Q9Y3P8 196 aa22.02■■□□□ 1.12
TSPAN9-208ENST00000640568 H7C0C1 242 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 J3KR12 359 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 ZMPSTE24O75844 475 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 HNRNPLP14866 589 aaKnown RBP eCLIP22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 KIR2DL1P43626 348 aaPredicted RBP22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 ATP5OP48047 213 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 NOMO1Q15155 1222 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 ACCSLQ4AC99 568 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 SERPINA13PQ6UXR4 307 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 LEKR1Q6ZMV7 388 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 METTL3Q86U44 580 aaKnown RBP22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 RASGEF1CQ8N431 466 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 RPLP0P6Q8NHW5 317 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 TFB1MQ8WVM0 346 aaKnown RBP22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 MS4A14Q96JA4 679 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 OLFM3Q96PB7 478 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 ZDHHC4Q9NPG8 344 aa22.01■■□□□ 1.11
TSPAN9-208ENST00000640568 MUC3AQ02505 3323 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 CXorf51AA0A1B0GTR3 108 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 TCRBV7S2A1N4TA0A589 114 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 ZNF185O15231 689 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 FANCGO15287 622 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 MAFKO60675 156 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 NEBLO76041 1014 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 CCNCP24863 283 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 SERPINH1P50454 418 aaKnown RBP22■■□□□ 1.11
TSPAN9-208ENST00000640568 EIF3EP60228 445 aaKnown RBP22■■□□□ 1.11
TSPAN9-208ENST00000640568 PTPRNQ16849 979 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 CCDC13Q8IYE1 715 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 BBS5Q8N3I7 341 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 SH2D3CQ8N5H7 860 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 ACTRT1Q8TDG2 376 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 USP33Q8TEY7 942 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 CASKIN2Q8WXE0 1202 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 CAPZA3Q96KX2 299 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 FERMT1Q9BQL6 677 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 COL25A1Q9BXS0 654 aaPredicted RBP22■■□□□ 1.11
TSPAN9-208ENST00000640568 TTC7AQ9ULT0 858 aaPredicted RBP22■■□□□ 1.11
TSPAN9-208ENST00000640568 HS3ST2Q9Y278 367 aa22■■□□□ 1.11
TSPAN9-208ENST00000640568 HACD1B0YJ81 288 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 KLF8O95600 359 aaPredicted RBP21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 PDGFBP01127 241 aaPredicted RBP21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 CLCN6P51797 869 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 PPIDQ08752 370 aaKnown RBP21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 XRCC4Q13426 336 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 HSF5Q4G112 596 aaPredicted RBP21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 CCDC105Q8IYK2 499 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 ZNF687Q8N1G0 1237 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 ALLCQ8N6M5 410 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 KDM1BQ8NB78 822 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 MRGPRX3Q96LB0 322 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 ZNF599Q96NL3 588 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 LGMNQ99538 433 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 FAM118BQ9BPY3 351 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 FRMD8P1Q9BZ68 369 aaPredicted RBP21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 PDFQ9HBH1 243 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 CACNA2D2Q9NY47 1150 aa21.99■■□□□ 1.11
TSPAN9-208ENST00000640568 ANTXRLA6NF34 631 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 ATG13O75143 517 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 MT-CO1P00395 513 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 SRCP12931 536 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 NTSR1P30989 418 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 IL12RB1P42701 662 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 PAFAH1B1P43034 410 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 ZNF33AQ06730 810 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 RFTN1Q14699 578 aaPredicted RBP21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 INO80DQ53TQ3 878 aaPredicted RBP21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 EOGTQ5NDL2 527 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 TMCO4Q5TGY1 634 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 CWF19L1Q69YN2 538 aaKnown RBP21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 Q6ZS52 159 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 CDKL3Q8IVW4 592 aaPredicted RBP21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 TXNDC5Q8NBS9 432 aaKnown RBP21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 LRRN4Q8WUT4 740 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 TSGA13Q96PP4 275 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 SLCO3A1Q9UIG8 710 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 FCF1Q9Y324 198 aaKnown RBP21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 ACTL7AQ9Y615 435 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 STON1Q9Y6Q2 735 aa21.98■■□□□ 1.11
TSPAN9-208ENST00000640568 GOLGA6L10A0A0M3HER8 536 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 ESPNB1AK53 854 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 DCNP07585 359 aaKnown RBP21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 RBP3P10745 1247 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 WASP42768 502 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 MAGEA9P43362 315 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 VASPP50552 380 aaPredicted RBP21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 ZNF235Q14590 738 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 LBRQ14739 615 aaKnown RBP21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 DLG2Q15700 870 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 HEATR6Q6AI08 1181 aaKnown RBP21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 DARS2Q6PI48 645 aaKnown RBP21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 IL17RCQ8NAC3 791 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 KIF18AQ8NI77 898 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 PBXIP1Q96AQ6 731 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 QKIQ96PU8 341 aaKnown RBP eCLIP21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 ACOX2Q99424 681 aa21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 CINPQ9BW66 212 aaPredicted RBP21.97■■□□□ 1.11
TSPAN9-208ENST00000640568 CEP44Q9C0F1 390 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms