RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	ESRP1	Q6NXG1	681 aa	Known RBP	12.04	□□□□□ -0.48
PAX6-238	ENST00000638755	NEK5	Q6P3R8	708 aa		12.04	□□□□□ -0.48
PAX6-238	ENST00000638755		Q6ZVU0	165 aa		12.04	□□□□□ -0.48
PAX6-238	ENST00000638755	SDR16C5	Q8N3Y7	309 aa		12.04	□□□□□ -0.48
PAX6-238	ENST00000638755	TATDN2	Q93075	761 aa		12.04	□□□□□ -0.48
PAX6-238	ENST00000638755	CCDC74A	Q96AQ1	378 aa		12.04	□□□□□ -0.48
PAX6-238	ENST00000638755	TCEAL2	Q9H3H9	227 aa	Predicted RBP	12.04	□□□□□ -0.48
PAX6-238	ENST00000638755	GULP1	Q9UBP9	304 aa		12.04	□□□□□ -0.48
PAX6-238	ENST00000638755	RABGEF1	Q9UJ41	708 aa		12.04	□□□□□ -0.48
PAX6-238	ENST00000638755	HS3ST3A1	Q9Y663	406 aa		12.04	□□□□□ -0.48
PAX6-238	ENST00000638755	SCN8A	Q9UQD0	1980 aa		12.04	□□□□□ -0.48
PAX6-238	ENST00000638755		A0A1W2PQ27	194 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755		A0A1W2PQ64	194 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755		A0A1W2PQC6	194 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	VPS37C	A5D8V6	355 aa	Predicted RBP	12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	KPNA3	O00505	521 aa	Predicted RBP	12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	MCF2L	O15068	1137 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	SPTLC2	O15270	562 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	RAD51B	O15315	384 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	MOCS2	O96007	188 aa	Predicted RBP	12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	ANXA6	P08133	673 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	COL8A1	P27658	744 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	CD97	P48960	835 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	MLLT10	P55197	1068 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	C1QBP	Q07021	282 aa	Known RBP	12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	GOLGA7B	Q2TAP0	167 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	TPRG1L	Q5T0D9	272 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	FHL5	Q5TD97	284 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	KYAT3	Q6YP21	454 aa	Known RBP	12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	C12orf56	Q8IXR9	622 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	LGI2	Q8N0V4	545 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	SIX6OS1	Q8N1H7	587 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	ANKRD52	Q8NB46	1076 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	FAM174A	Q8TBP5	190 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	SSC4D	Q8WTU2	575 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	TMEM74	Q96NL1	305 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	CPEB1	Q9BZB8	566 aa	Known RBP	12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	NIF3L1	Q9GZT8	377 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	GPR27	Q9NS67	375 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	SIRPG	Q9P1W8	387 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	SPAST	Q9UBP0	616 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	APOBEC3B	Q9UH17	382 aa	Known RBP	12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	SRPRB	Q9Y5M8	271 aa	Known RBP	12.03	□□□□□ -0.48
PAX6-238	ENST00000638755	TRPM6	Q9BX84	2022 aa		12.03	□□□□□ -0.48
PAX6-238	ENST00000638755		A0A1W2PQM1	296 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	C9orf172	C9J069	976 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	ALOX15B	O15296	676 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	SPINT1	O43278	529 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	PAK4	O96013	591 aa	Predicted RBP	12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	CTSL	P07711	333 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	LCP1	P13796	627 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	ELAVL4	P26378	380 aa	Known RBP	12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	TNFRSF8	P28908	595 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	CCKBR	P32239	447 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	RABIF	P47224	123 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	NUCB2	P80303	420 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	CEBPZ	Q03701	1054 aa	Known RBP	12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	SULT2A1	Q06520	285 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	EIF2B5	Q13144	721 aa	Known RBP	12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	DLG2	Q15700	870 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	MSANTD2	Q6P1R3	559 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	BRAP	Q7Z569	592 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	SRRM1	Q8IYB3	904 aa	Known RBP	12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	SLC4A11	Q8NBS3	891 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	BTN2A2	Q8WVV5	523 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	AZIN2	Q96A70	460 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	SLC17A9	Q9BYT1	436 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	SLC39A2	Q9NP94	309 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	DYRK4	Q9NR20	520 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	FOXD4L1	Q9NU39	408 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	CGN	Q9P2M7	1197 aa	Known RBP	12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	XPO7	Q9UIA9	1087 aa	Known RBP	12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	SLC25A13	Q9UJS0	675 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	UNC13C	Q8NB66	2214 aa		12.02	□□□□□ -0.49
PAX6-238	ENST00000638755	LMO7DN	F2Z398	122 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	XPO1	O14980	1071 aa	Known RBP	12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	YY2	O15391	372 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	NEFL	P07196	543 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	RNF224	P0DH78	156 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	GNLY	P22749	145 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	RAD23B	P54727	409 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	CCDC15	Q0P6D6	951 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	FGL2	Q14314	439 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	TCEA2	Q15560	299 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	KNOP1	Q1ED39	458 aa	Known RBP	12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	TMEM259	Q4ZIN3	620 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	RAP1GAP2	Q684P5	730 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	ARHGAP17	Q68EM7	881 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	CIR1	Q86X95	450 aa	Predicted RBP	12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	KY	Q8NBH2	561 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	TAS1R2	Q8TE23	839 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	ERCC4	Q92889	916 aa	Predicted RBP	12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	RNF34	Q969K3	372 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	ABHD17A	Q96GS6	310 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	FCRL2	Q96LA5	508 aa	Predicted RBP	12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	LRRC61	Q9BV99	259 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	BACH2	Q9BYV9	841 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	LRRC27	Q9C0I9	530 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	TNMD	Q9H2S6	317 aa		12.01	□□□□□ -0.49
PAX6-238	ENST00000638755	MED13	Q9UHV7	2174 aa		12.01	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms