RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	ANKRD13B	Q86YJ7	626 aa		11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	EPHX4	Q8IUS5	362 aa		11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	MMAA	Q8IVH4	418 aa	Known RBP	11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	CBR4	Q8N4T8	237 aa		11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	AGR3	Q8TD06	166 aa		11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	PPWD1	Q96BP3	646 aa	Known RBP	11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	RNF157	Q96PX1	679 aa		11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	PEBP4	Q96S96	227 aa		11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	GATA5	Q9BWX5	397 aa	Predicted RBP	11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	UPF3A	Q9H1J1	476 aa	Known RBP	11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	MAGEE1	Q9HCI5	957 aa		11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	AGO4	Q9HCK5	861 aa	Known RBP	11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	PI4KB	Q9UBF8	816 aa		11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	TRAF6	Q9Y4K3	522 aa		11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	SPO11	Q9Y5K1	396 aa		11.27	□□□□□ -0.6
STRADA-231	ENST00000638708	ZNF541	Q9H0D2	1346 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	LRRC37A	A6NMS7	1700 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	WDR27	A2RRH5	827 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	RGS13	O14921	159 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	MSI1	O43347	362 aa	Known RBP	11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	MLN	P12872	115 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	NAT1	P18440	290 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	POLR2E	P19388	210 aa	Known RBP	11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	TGM1	P22735	817 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	GP5	P40197	560 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	LIG4	P49917	911 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	PRKAA2	P54646	552 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	PRKAA1	Q13131	559 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	SELENBP1	Q13228	472 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.27	□□□□□ -0.61	4e-8	■■■■□ 22.4
STRADA-231	ENST00000638708	STIL	Q15468	1287 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	MAPRE2	Q15555	327 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	SLC27A3	Q5K4L6	730 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	TMEM198	Q66K66	360 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	SMYD5	Q6GMV2	418 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	ZNF773	Q6PK81	442 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	TAS1R3	Q7RTX0	852 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	ITIH5	Q86UX2	942 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	ZBTB46	Q86UZ6	589 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	EMC1	Q8N766	993 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	PLD5	Q8N7P1	536 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	SNX31	Q8N9S9	440 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	ABHD11	Q8NFV4	315 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	DCPS	Q96C86	337 aa	Known RBP	11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	C9orf16	Q9BUW7	83 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	IL22	Q9GZX6	179 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	ZNF358	Q9NW07	568 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	DNMT3B	Q9UBC3	853 aa	Known RBP	11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	PSAT1	Q9Y617	370 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708	LY75	O60449	1722 aa		11.27	□□□□□ -0.61
STRADA-231	ENST00000638708		H0YCG3	227 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	EIF3F	O00303	357 aa	Predicted RBP	11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	APOL1	O14791	398 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	CLOCK	O15516	846 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	GMNN	O75496	209 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	SEC24D	O94855	1032 aa	Predicted RBP	11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	METTL18	O95568	372 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	PGAM1	P18669	254 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	MATN1	P21941	496 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	YWHAE	P62258	255 aa	Known RBP	11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	MPP1	Q00013	466 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	OCA2	Q04671	838 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	SEMA5A	Q13591	1074 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	ATP6AP1	Q15904	470 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	KIZ	Q2M2Z5	673 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	TIGD2	Q4W5G0	525 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	SMUG1	Q53HV7	270 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	DENND1B	Q6P3S1	775 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	LINC00299	Q6ZSB3	139 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	VASH1	Q7L8A9	365 aa	Predicted RBP	11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	CLEC14A	Q86T13	490 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	ANKRD13A	Q8IZ07	590 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	TNS4	Q8IZW8	715 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	PARP8	Q8N3A8	854 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	OR2T34	Q8NGX1	318 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	OR2T3	Q8NH03	318 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	ZC3H15	Q8WU90	426 aa	Known RBP	11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	TFAP2B	Q92481	460 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	TRIB2	Q92519	343 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	ERLEC1	Q96DZ1	483 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	RMND5A	Q9H871	391 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	MOV10	Q9HCE1	1003 aa	Known RBP	11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	SPAG4	Q9NPE6	437 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	AKIP1	Q9NQ31	210 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	MRGBP	Q9NV56	204 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	ASNSD1	Q9NWL6	643 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	CD300A	Q9UGN4	299 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	VPS51	Q9UID3	782 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	POU2F3	Q9UKI9	436 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	AGO2	Q9UKV8	859 aa	Known RBP	11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	SYNPO2	Q9UMS6	1093 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	TIMM22	Q9Y584	194 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	STYXL1	Q9Y6J8	313 aa		11.26	□□□□□ -0.61
STRADA-231	ENST00000638708	KCNU1	A8MYU2	1149 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms