RNA–Protein interactions for RNA: ENST00000637886.1

UBE3A-226, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,725 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-226ENST00000637886 ATP13A3Q9H7F0 1226 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 MAT2BQ9NZL9 334 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 E7ENQ6 273 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 TSPAN3O60637 253 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 OTUD4Q01804 1114 aaKnown RBP13.11□□□□□ -0.31
UBE3A-226ENST00000637886 CUL2Q13617 745 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 GSPT2Q8IYD1 628 aaKnown RBP13.11□□□□□ -0.31
UBE3A-226ENST00000637886 TNKS2Q9H2K2 1166 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 NDUFA13Q9P0J0 144 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 MAFFQ9ULX9 164 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 TNPO3Q9Y5L0 923 aaKnown RBP13.11□□□□□ -0.31
UBE3A-226ENST00000637886 NPHP3-ACAD11A0A0J9YXS1 232 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 FAM172BPA6NC97 362 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 KCNQ3O43525 872 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 TLL1O43897 1013 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 SMNDC1O75940 238 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ELK3P41970 407 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ERVK-9P63128 1117 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 CRY1Q16526 586 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 FAM126BQ8IXS8 530 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 C5orf34Q96MH7 638 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 TBC1D10AQ9BXI6 508 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 TBX20Q9UMR3 447 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ERVK-11Q9UQG0 969 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 LARGE1O95461 756 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ALAS2P22557 587 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 IL18R1Q13478 541 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ZDHHC13Q8IUH4 622 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 DNAAF1Q8NEP3 725 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 MTFMTQ96DP5 389 aaKnown RBP13.11□□□□□ -0.31
UBE3A-226ENST00000637886 CPB2Q96IY4 423 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 NMT2O60551 498 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 CATP04040 527 aaKnown RBP13.11□□□□□ -0.31
UBE3A-226ENST00000637886 UBTFL6P0CB48 400 aaPredicted RBP13.11□□□□□ -0.31
UBE3A-226ENST00000637886 PRKAA2P54646 552 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 SELENOVP59797 346 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 RAB39AQ14964 217 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ZCWPW2Q504Y3 356 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 CPA6Q8N4T0 437 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 CCDC33Q8N5R6 958 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 CHCHD6Q9BRQ6 235 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 LDAHQ9H6V9 325 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 DCP1AQ9NPI6 582 aaPredicted RBP13.11□□□□□ -0.31
UBE3A-226ENST00000637886 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBE3A-226ENST00000637886 VPS4AQ9UN37 437 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ESYT3A0FGR9 886 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 RB1P06400 928 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 POU6F1Q14863 301 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ZBTB49Q6ZSB9 765 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 PHF10Q8WUB8 498 aaKnown RBP13.11□□□□□ -0.31
UBE3A-226ENST00000637886 RNF31Q96EP0 1072 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ADAM33Q9BZ11 813 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 CLIC5Q9NZA1 410 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ING4Q9UNL4 249 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 NDUFAF1Q9Y375 327 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ACADSP16219 412 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 IL12BP29460 328 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 RASAL3Q86YV0 1011 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 RNF121Q9H920 327 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 ITGA11Q9UKX5 1188 aa13.11□□□□□ -0.31
UBE3A-226ENST00000637886 IRGMA1A4Y4 181 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 H0YJX3 145 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 NUAK1O60285 661 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 S100A3P33764 101 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 POLD2P49005 469 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 AGKQ53H12 422 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 AADATQ8N5Z0 425 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 COX4I2Q96KJ9 171 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 DNMT1P26358 1616 aaKnown RBP13.1□□□□□ -0.31
UBE3A-226ENST00000637886 GAKO14976 1311 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 SERPINA3P01011 423 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 VTNP04004 478 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 SLC35G4P0C7Q5 338 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 NAMPTP43490 491 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 AP5B1Q2VPB7 878 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
UBE3A-226ENST00000637886 HYIQ5T013 277 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 GPT2Q8TD30 523 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 RAD51AP1Q96B01 352 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 IL17RAQ96F46 866 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 ELOVL4Q9GZR5 314 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 ANKZF1Q9H8Y5 726 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 ACOT9Q9Y305 439 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 PGK1P00558 417 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 LTFP02788 710 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 ANPEPP15144 967 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 MAPK8P45983 427 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 LRIG3Q6UXM1 1119 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 TPGS1Q6ZTW0 290 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 CDYL2Q8N8U2 506 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 SLC44A5Q8NCS7 719 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 ZDHHC15Q96MV8 337 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 SEPHS2Q99611 448 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 UBDO15205 165 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 OGTO15294 1046 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 MMP14P50281 582 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 MPP3Q13368 585 aa13.1□□□□□ -0.31
UBE3A-226ENST00000637886 DCTN2Q13561 401 aaKnown RBP13.1□□□□□ -0.31
UBE3A-226ENST00000637886 SLC9A4Q6AI14 798 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms