RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 HEXDCQ8WVB3 486 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 SH3KBP1Q96B97 665 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 ZIM3Q96PE6 472 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 CSPG4P5Q96PW8 444 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 PANX3Q96QZ0 392 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 SPATA16Q9BXB7 569 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 XYLT2Q9H1B5 865 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 FBXW11Q9UKB1 542 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TM9SF1O15321 606 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TSPAN3O60637 253 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TBL1XO60907 577 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 SRP72O76094 671 aaKnown RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 CYP11A1P05108 521 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 GALTP07902 379 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 GOT1P17174 413 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 CHRM3P20309 590 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 FSHRP23945 695 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 LMO2P25791 158 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 MDH1P40925 334 aaKnown RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 CD151P48509 253 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 RGS19P49795 217 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 ZNF132P52740 706 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 DPYSL2Q16555 572 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 IMPG1Q17R60 797 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 LONRF1Q17RB8 773 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 LRRC8EQ6NSJ5 796 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 BEND5Q7L4P6 421 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 MREGQ8N565 214 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 CCNYL1Q8N7R7 359 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 WFIKKN2Q8TEU8 576 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 USP6NLQ92738 828 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 DPEP3Q9H4B8 488 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TASP1Q9H6P5 420 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 KIAA1551Q9HCM1 1747 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 CHST7Q9NS84 486 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 NRXN2Q9P2S2 1712 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 BAG5Q9UL15 447 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 STK38LQ9Y2H1 464 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 MYADML2A6NDP7 307 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TBC1D3BA6NDS4 549 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 KCNK1O00180 336 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 PDE2AO00408 941 aaPredicted RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 DDX3YO15523 660 aaKnown RBP5.62□□□□□ -1.51
CHD2-227ENST00000637572 GJB6O95452 261 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 HNRNPA1P09651 372 aaKnown RBP eCLIP5.62□□□□□ -1.51
CHD2-227ENST00000637572 TPSB2P20231 275 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TACR2P21452 398 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 ARFIP2P53365 341 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TAS2R40P59535 323 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 OCRLQ01968 901 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 STX3Q13277 289 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 MOGSQ13724 837 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TPSAB1Q15661 275 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.62□□□□□ -1.51
CHD2-227ENST00000637572 FAXCQ5TGI0 409 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 FUKQ8N0W3 1084 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 LMO3Q8TAP4 145 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 EFHD1Q9BUP0 239 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 BBS2Q9BXC9 721 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TLR9Q9NR96 1032 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 ZNF358Q9NW07 568 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 GTSE1Q9NYZ3 720 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 RAPGEFL1Q9UHV5 662 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 APPL1Q9UKG1 709 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TMCO1Q9UM00 188 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 ANKRD6Q9Y2G4 727 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 TBC1D30Q9Y2I9 924 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 ACOT9Q9Y305 439 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 YIPF1Q9Y548 306 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 PCDHA11Q9Y5I1 949 aa5.62□□□□□ -1.51
CHD2-227ENST00000637572 WDR91A4D1P6 747 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 TRIM49D1C9J1S8 452 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 SLCO1B7G3V0H7 640 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 KPNA5O15131 536 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ASLP04424 464 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 HAPLN1P10915 354 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 PECAM1P16284 738 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 GRK2P25098 689 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 CDKN2BP42772 138 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 RPL21P46778 160 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 AARSP49588 968 aaKnown RBP eCLIP5.61□□□□□ -1.518e-8■■□□□ 13.1
CHD2-227ENST00000637572 TTC31Q49AM3 519 aaPredicted RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 FNDC3BQ53EP0 1204 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 TRMT11Q7Z4G4 463 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 TMC3Q7Z5M5 1100 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 DNAAF5Q86Y56 855 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 SLC22A9Q8IVM8 553 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 MYO1HQ8N1T3 1032 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 LPCAT1Q8NF37 534 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 PLEKHO2Q8TD55 490 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 OSCP1Q8WVF1 389 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 MAML1Q92585 1016 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 EXT2Q93063 718 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 ZNF599Q96NL3 588 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 PNKPQ96T60 521 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 CFHR5Q9BXR6 569 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 EPC1Q9H2F5 836 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 AGO3Q9H9G7 860 aaKnown RBP5.61□□□□□ -1.51
CHD2-227ENST00000637572 NMRK1Q9NWW6 199 aa5.61□□□□□ -1.51
CHD2-227ENST00000637572 PHIPQ8WWQ0 1821 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms