RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CTSLP07711 333 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 C1SP09871 688 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 HOXB3P14651 431 aaPredicted RBP18.92■□□□□ 0.62
CLN6-220ENST00000637450 TAS2R38P59533 333 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 CYP4F3Q08477 520 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 DNAJC3Q13217 504 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 STAT4Q14765 748 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 HSP90AA4PQ58FG1 418 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 ARTNQ5T4W7 220 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 FAM102AQ5T9C2 384 aaPredicted RBP18.92■□□□□ 0.62
CLN6-220ENST00000637450 LRRC31Q6UY01 552 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 TMIEQ8NEW7 156 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 PREBQ9HCU5 417 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 TMPRSS4Q9NRS4 437 aa18.92■□□□□ 0.62
CLN6-220ENST00000637450 IGLV3-10A0A075B6K4 115 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 A0A0D9SEW6 157 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 PRAMEF26H0Y7S4 382 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 SMAD6O43541 496 aaKnown RBP18.91■□□□□ 0.62
CLN6-220ENST00000637450 CDK4P11802 303 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 CHRNA3P32297 505 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 FLT3P36888 993 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 SETMARQ53H47 684 aaPredicted RBP18.91■□□□□ 0.62
CLN6-220ENST00000637450 PIP5KL1Q5T9C9 394 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 SFMBT2Q5VUG0 894 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 TAF3Q5VWG9 929 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 KANSL1Q7Z3B3 1105 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 BNIPLQ7Z465 357 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 DCAF4L2Q8NA75 395 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 TSC1Q92574 1164 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 MPP6Q9NZW5 540 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 CHMP5Q9NZZ3 219 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 TMEM59LQ9UK28 342 aa18.91■□□□□ 0.62
CLN6-220ENST00000637450 E9PAM4 449 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 RNGTTO60942 597 aaKnown RBP18.9■□□□□ 0.62
CLN6-220ENST00000637450 RFPL3O75679 317 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 LSM8O95777 96 aaKnown RBP18.9■□□□□ 0.62
CLN6-220ENST00000637450 UCHL3P15374 230 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 RRM1P23921 792 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 ACADVLP49748 655 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 CLCN6P51797 869 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 CCDC15Q0P6D6 951 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 C2CD6Q53TS8 623 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 C6orf118Q5T5N4 469 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 TRNP1Q6NT89 227 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 NEK5Q6P3R8 708 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 TFAP2DQ7Z6R9 452 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 NOP9Q86U38 636 aaKnown RBP18.9■□□□□ 0.62
CLN6-220ENST00000637450 ARRDC3Q96B67 414 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 CCDC114Q96M63 670 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 HAPLN3Q96S86 360 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 STK33Q9BYT3 514 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 SAMSN1Q9NSI8 373 aaKnown RBP18.9■□□□□ 0.62
CLN6-220ENST00000637450 ZNF212Q9UDV6 495 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 DACH1Q9UI36 760 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 CA5BQ9Y2D0 317 aa18.9■□□□□ 0.62
CLN6-220ENST00000637450 URB1O60287 2271 aaKnown RBP18.9■□□□□ 0.62
CLN6-220ENST00000637450 FAM170AA1A519 330 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 ILVBLA1L0T0 632 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 KPNA3O00505 521 aaPredicted RBP18.89■□□□□ 0.61
CLN6-220ENST00000637450 PES1O00541 588 aaKnown RBP18.89■□□□□ 0.61
CLN6-220ENST00000637450 SRGAP2O75044 1071 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 OR1E1P30953 314 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 COL28A1Q2UY09 1125 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 LINGO4Q6UY18 593 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 ARCQ7LC44 396 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 TMEM145Q8NBT3 493 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 CHST14Q8NCH0 376 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 HNRNPLLQ8WVV9 542 aaKnown RBP18.89■□□□□ 0.61
CLN6-220ENST00000637450 CPA5Q8WXQ8 436 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 KLHDC7BQ96G42 594 aa18.89■□□□□ 0.61
CLN6-220ENST00000637450 COL5A1P20908 1838 aaPredicted RBP18.88■□□□□ 0.61
CLN6-220ENST00000637450 SMG1Q96Q15 3661 aaKnown RBP18.88■□□□□ 0.61
CLN6-220ENST00000637450 A0A1W2PQU0 124 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 GOLGA8SH3BPF8 625 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 RNF103O00237 685 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 SLC31A1O15431 190 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 ZNF821O75541 412 aaPredicted RBP18.88■□□□□ 0.61
CLN6-220ENST00000637450 PRNPP04156 253 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 MMEP08473 750 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 JUPP14923 745 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 GLDCP23378 1020 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 TCP11X2Q5H9J9 407 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
CLN6-220ENST00000637450 ZNF783Q6ZMS7 281 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 HORMAD1Q86X24 394 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 MSANTD4Q8NCY6 345 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 OR7D4Q8NG98 312 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 CFAP57Q96MR6 1250 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 HDAC8Q9BY41 377 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 SCUBE2Q9NQ36 999 aa18.88■□□□□ 0.61
CLN6-220ENST00000637450 F8VZ95 297 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 ZMPSTE24O75844 475 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 ENDOD1O94919 500 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 CKMT2P17540 419 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 EEF1GP26641 437 aaKnown RBP18.87■□□□□ 0.61
CLN6-220ENST00000637450 HNF1BP35680 557 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 CLDN6P56747 220 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 NOMO3P69849 1222 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 SLC20A2Q08357 652 aa18.87■□□□□ 0.61
CLN6-220ENST00000637450 ZNF284Q2VY69 593 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms