RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 GIPC1O14908 333 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 LRIG2O94898 1065 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 CER1O95813 267 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D3HP0C7X1 549 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 SKILP12757 684 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 CEACAM1P13688 526 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 GLDCP23378 1020 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 PRKCIP41743 596 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 MAPKAPK2P49137 400 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 CSNK1EP49674 416 aaKnown RBP14.12□□□□□ -0.15
PNKP-228ENST00000637325 DNA2P51530 1060 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 SLC20A2Q08357 652 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 ZSCAN23Q3MJ62 389 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 POM121L1PQ3SYA9 428 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D3GQ6DHY5 549 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D3CQ6IPX1 549 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 ZNF571Q7Z3V5 609 aaPredicted RBP14.12□□□□□ -0.15
PNKP-228ENST00000637325 TBC1D3Q8IZP1 549 aaPredicted RBP14.12□□□□□ -0.15
PNKP-228ENST00000637325 PIP4K2CQ8TBX8 421 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 SYT11Q9BT88 431 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 MAGEB5Q9BZ81 275 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 DYRK4Q9NR20 520 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 DNAAF2Q9NVR5 837 aaKnown RBP14.12□□□□□ -0.15
PNKP-228ENST00000637325 PPM1HQ9ULR3 514 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 HPCAL4Q9UM19 191 aa14.12□□□□□ -0.15
PNKP-228ENST00000637325 FAM72CH0Y354 149 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 PLK4O00444 970 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 SMAD6O43541 496 aaKnown RBP14.11□□□□□ -0.15
PNKP-228ENST00000637325 FTLP02792 175 aaPredicted RBP14.11□□□□□ -0.15
PNKP-228ENST00000637325 GZMAP12544 262 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 PSMA2P25787 234 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 CHRNA3P32297 505 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 ADPRHP54922 357 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 ZNF252P-AS1Q0IIN9 211 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 CCDC15Q0P6D6 951 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 SCAPQ12770 1279 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 SEMA3BQ13214 749 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 SLC14A1Q13336 389 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 TDRD12Q587J7 1177 aaKnown RBP14.11□□□□□ -0.15
PNKP-228ENST00000637325 FIGNQ5HY92 759 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 PPP1R15BQ5SWA1 713 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 FAM72AQ5TYM5 149 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 MANEALQ5VSG8 457 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 FAM72DQ6L9T8 149 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 TMC6Q7Z403 805 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 FAM72BQ86X60 149 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 ZNF354CQ86Y25 554 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 C1orf216Q8TAB5 229 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 CPLX3Q8WVH0 158 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 EPAS1Q99814 870 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.11□□□□□ -0.15
PNKP-228ENST00000637325 TTYH3Q9C0H2 523 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 TNKS2Q9H2K2 1166 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 GAREM1Q9H706 876 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 TM9SF3Q9HD45 589 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 OSGEPQ9NPF4 335 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 TMEM248Q9NWD8 314 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 ZNF212Q9UDV6 495 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 SARDHQ9UL12 918 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 FZD10Q9ULW2 581 aa14.11□□□□□ -0.15
PNKP-228ENST00000637325 A0A1W2PPC4 97 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 UPK3BL1B0FP48 263 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 UPK3BL2E5RIL1 263 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 KPNA3O00505 521 aaPredicted RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 DDX3XO00571 662 aaKnown RBP eCLIP14.1□□□□□ -0.15
PNKP-228ENST00000637325 SLC7A4O43246 635 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 ATMINO43313 823 aaPredicted RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 CREB3O43889 395 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 RAMP2O60895 175 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 RTN2O75298 545 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 PRNPP04156 253 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 IGHV4-34P06331 123 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 TPM3P06753 285 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 EPHB2P29323 1055 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 L1CAMP32004 1257 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 DRD3P35462 400 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 ACVRL1P37023 503 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 GRIA4P48058 902 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 SERPINH1P50454 418 aaKnown RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 CCR5P51681 352 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 METAP1P53582 386 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 AIF1P55008 147 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 C21orf59P57076 290 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 CNTN1Q12860 1018 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 MAMLD1Q13495 774 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 POLD3Q15054 466 aaPredicted RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 HLA-BQ31612 363 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 ARTNQ5T4W7 220 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 E4F1Q66K89 784 aaPredicted RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 PLEKHA7Q6IQ23 1121 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 C22orf39Q6P5X5 142 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 PRPF39Q86UA1 669 aaKnown RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 VPS36Q86VN1 386 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 NLRP14Q86W24 1093 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 DNAAF5Q86Y56 855 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 PYROXD2Q8N2H3 581 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 OR2A12Q8NGT7 310 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 ARHGEF2Q92974 986 aaKnown RBP14.1□□□□□ -0.15
PNKP-228ENST00000637325 SKA1Q96BD8 255 aa14.1□□□□□ -0.15
PNKP-228ENST00000637325 ZNF653Q96CK0 615 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms