RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 HIC2Q96JB3 615 aa16.85■□□□□ 0.29
CLN3-255ENST00000637100 NPY6RQ99463 290 aa16.85■□□□□ 0.29
CLN3-255ENST00000637100 SRRTQ9BXP5 876 aaKnown RBP16.85■□□□□ 0.29
CLN3-255ENST00000637100 FAM204AQ9H8W3 233 aa16.85■□□□□ 0.29
CLN3-255ENST00000637100 TMEM51Q9NW97 253 aa16.85■□□□□ 0.29
CLN3-255ENST00000637100 ARHGEF38Q9NXL2 777 aa16.85■□□□□ 0.29
CLN3-255ENST00000637100 RRN3Q9NYV6 651 aa16.85■□□□□ 0.29
CLN3-255ENST00000637100 VANGL2Q9ULK5 521 aa16.85■□□□□ 0.29
CLN3-255ENST00000637100 MGAQ8IWI9 3026 aa16.85■□□□□ 0.29
CLN3-255ENST00000637100 IGLV3-10A0A075B6K4 115 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 LY6G6EA0A0G2JKS1 128 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 GTPBP10A4D1E9 387 aaKnown RBP16.84■□□□□ 0.29
CLN3-255ENST00000637100 EIF4E1BA6NMX2 242 aaKnown RBP16.84■□□□□ 0.29
CLN3-255ENST00000637100 RNF103O00237 685 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 DAB1O75553 588 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 MT-CO3P00414 261 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 GP1BAP07359 652 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 THEGLP0DJG4 465 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 CHRNA3P32297 505 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 ACTN2P35609 894 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 CLCN6P51797 869 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 CCDC15Q0P6D6 951 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 ACCSLQ4AC99 568 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 C11orf57Q6ZUT1 292 aaPredicted RBP16.84■□□□□ 0.29
CLN3-255ENST00000637100 SETD3Q86TU7 594 aaPredicted RBP16.84■□□□□ 0.29
CLN3-255ENST00000637100 ARRDC3Q96B67 414 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 C1orf74Q96LT6 269 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 HDAC8Q9BY41 377 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 ANLNQ9NQW6 1124 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 UCKL1Q9NWZ5 548 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 ZNF212Q9UDV6 495 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 VPS28Q9UK41 221 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 ZFR2Q9UPR6 939 aaKnown RBP16.84■□□□□ 0.29
CLN3-255ENST00000637100 CA5BQ9Y2D0 317 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 HS3ST3A1Q9Y663 406 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 U3KQA8 63 aa16.84■□□□□ 0.29
CLN3-255ENST00000637100 CXorf51AA0A1B0GTR3 108 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 A0A1W2PQU0 124 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 OPA1O60313 960 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 ZNF821O75541 412 aaPredicted RBP16.83■□□□□ 0.28
CLN3-255ENST00000637100 PIAS2O75928 621 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 CNTN5O94779 1100 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 SLC9A1P19634 815 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 KRT83P78385 493 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 SLC6A3Q01959 620 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 PAK1Q13153 545 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 ALFQ53S48 1182 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 BRMS1LQ5PSV4 323 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 ACBD5Q5T8D3 534 aaPredicted RBP16.83■□□□□ 0.28
CLN3-255ENST00000637100 GJB7Q6PEY0 223 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 IGF2-ASQ6U949 168 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 GCNT7Q6ZNI0 430 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 FAM183BPQ6ZVS7 135 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 GPR155Q7Z3F1 870 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 BNIPLQ7Z465 357 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 DCP2Q8IU60 420 aaKnown RBP16.83■□□□□ 0.28
CLN3-255ENST00000637100 DCAF4L2Q8NA75 395 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 FCRL3Q96P31 734 aaPredicted RBP16.83■□□□□ 0.28
CLN3-255ENST00000637100 C2orf49Q9BVC5 232 aaPredicted RBP16.83■□□□□ 0.28
CLN3-255ENST00000637100 USP29Q9HBJ7 922 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 APEX2Q9UBZ4 518 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 VPS51Q9UID3 782 aa16.83■□□□□ 0.28
CLN3-255ENST00000637100 SMAD6O43541 496 aaKnown RBP16.82■□□□□ 0.28
CLN3-255ENST00000637100 SDC3O75056 442 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 PRNPP04156 253 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 PRB1P04280 392 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 ERBB2P04626 1255 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 HNRNPA2B1P22626 353 aaKnown RBP16.82■□□□□ 0.28
CLN3-255ENST00000637100 SCNN1AP37088 669 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 NUMBP49757 651 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 PTPN20Q4JDL3 420 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 DPY19L2P1Q6NXN4 242 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 IRF2BP1Q8IU81 584 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 ZDHHC17Q8IUH5 632 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 SPACA3Q8IXA5 215 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 SLC22A18ASQ8N1D0 253 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 C1orf131Q8NDD1 294 aaKnown RBP16.82■□□□□ 0.28
CLN3-255ENST00000637100 OR13H1Q8NG92 308 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 SNRNP27Q8WVK2 155 aaKnown RBP16.82■□□□□ 0.28
CLN3-255ENST00000637100 WBP1Q96G27 269 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 BMFQ96LC9 184 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 ZNF578Q96N58 590 aaPredicted RBP16.82■□□□□ 0.28
CLN3-255ENST00000637100 PIGVQ9NUD9 493 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 NLGN3Q9NZ94 848 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 CTNND2Q9UQB3 1225 aa16.82■□□□□ 0.28
CLN3-255ENST00000637100 K7ERQ8 282 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 M0QYT0 321 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 RIOK3O14730 519 aaKnown RBP16.81■□□□□ 0.28
CLN3-255ENST00000637100 SCAMP1O15126 338 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 SLC31A1O15431 190 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 SNAP91O60641 907 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 GRAP2O75791 330 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 ZMPSTE24O75844 475 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 ADCY5O95622 1261 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 FGFR1OPO95684 399 aaKnown RBP16.81■□□□□ 0.28
CLN3-255ENST00000637100 ZNF18P17022 549 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 CDH5P33151 784 aaPredicted RBP16.81■□□□□ 0.28
CLN3-255ENST00000637100 CLCN1P35523 988 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 GABRB2P47870 512 aa16.81■□□□□ 0.28
CLN3-255ENST00000637100 STX17P56962 302 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms