RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CCDC33Q8N5R6 958 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 ALLCQ8N6M5 410 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 MYO19Q96H55 970 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 IER2Q9BTL4 223 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 CACNA2D2Q9NY47 1150 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 IPO11Q9UI26 975 aaKnown RBP16.34■□□□□ 0.21
CLN6-216ENST00000636876 HS3ST2Q9Y278 367 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 HEY1Q9Y5J3 304 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 RAD54BQ9Y620 910 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 STON1Q9Y6Q2 735 aa16.34■□□□□ 0.21
CLN6-216ENST00000636876 J3KR12 359 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 TJP3O95049 919 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 MAP3K6O95382 1288 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 MT-CO1P00395 513 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 MX2P20592 715 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 IL12RB1P42701 662 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 GEMIN4P57678 1058 aaKnown RBP16.33■□□□□ 0.2
CLN6-216ENST00000636876 SERPINA13PQ6UXR4 307 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 ARHGAP36Q6ZRI8 547 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 SH2D3CQ8N5H7 860 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 TXNDC5Q8NBS9 432 aaKnown RBP16.33■□□□□ 0.2
CLN6-216ENST00000636876 TMEM245Q9H330 911 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 SP110Q9HB58 689 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 PDFQ9HBH1 243 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 SLCO3A1Q9UIG8 710 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 MMP17Q9ULZ9 603 aa16.33■□□□□ 0.2
CLN6-216ENST00000636876 WASH3PC4AMC7 463 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 APOC4-APOC2K7ER74 178 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 SGK1O00141 431 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 ATP9BO43861 1147 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 MAFKO60675 156 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 ADAM23O75077 832 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 ATG13O75143 517 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 CD160O95971 181 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 APOC2P02655 101 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 SRCP12931 536 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 PECAM1P16284 738 aaPredicted RBP16.32■□□□□ 0.2
CLN6-216ENST00000636876 PRKCHP24723 683 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 CXCR5P32302 372 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 NNMTP40261 264 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 GARSP41250 739 aaKnown RBP16.32■□□□□ 0.2
CLN6-216ENST00000636876 WASP42768 502 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 NR2C2P49116 596 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 SERPINH1P50454 418 aaKnown RBP16.32■□□□□ 0.2
CLN6-216ENST00000636876 IL10RBQ08334 325 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 PDK1Q15118 436 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 EOGTQ5NDL2 527 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 CCDC181Q5TID7 509 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 SDE2Q6IQ49 451 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 LEKR1Q6ZMV7 388 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 BZW1Q7L1Q6 419 aaKnown RBP16.32■□□□□ 0.2
CLN6-216ENST00000636876 SPEM1Q8N4L4 309 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 TMEM105Q8N8V8 129 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 ATP11CQ8NB49 1132 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 P3H4Q92791 437 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 HAUS1Q96CS2 278 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 OLFM3Q96PB7 478 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 TSGA13Q96PP4 275 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 NAPGQ99747 312 aaPredicted RBP16.32■□□□□ 0.2
CLN6-216ENST00000636876 GABRG3Q99928 467 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 SAE1Q9UBE0 346 aaPredicted RBP16.32■□□□□ 0.2
CLN6-216ENST00000636876 UBA2Q9UBT2 640 aaPredicted RBP16.32■□□□□ 0.2
CLN6-216ENST00000636876 SNX12Q9UMY4 172 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 ACTL7AQ9Y615 435 aa16.32■□□□□ 0.2
CLN6-216ENST00000636876 TTC34A8MYJ7 566 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 K7ERQ8 282 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 SMAD6O43541 496 aaKnown RBP16.31■□□□□ 0.2
CLN6-216ENST00000636876 CEP104O60308 925 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 CLCN6P51797 869 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 ETF1P62495 437 aaKnown RBP16.31■□□□□ 0.2
CLN6-216ENST00000636876 MTAPQ13126 283 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 KLF1Q13351 362 aaPredicted RBP16.31■□□□□ 0.2
CLN6-216ENST00000636876 DLG2Q15700 870 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 INO80DQ53TQ3 878 aaPredicted RBP16.31■□□□□ 0.2
CLN6-216ENST00000636876 SLC13A5Q86YT5 568 aaPredicted RBP16.31■□□□□ 0.2
CLN6-216ENST00000636876 ZNF366Q8N895 744 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 FRS2Q8WU20 508 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 CASKIN2Q8WXE0 1202 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 HDAC11Q96DB2 347 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 PBKQ96KB5 322 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 SLC8A2Q9UPR5 921 aa16.31■□□□□ 0.2
CLN6-216ENST00000636876 TCRBV7S2A1N4TA0A589 114 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 CTAGE9A4FU28 777 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 PPP1R12AO14974 1030 aaPredicted RBP16.3■□□□□ 0.2
CLN6-216ENST00000636876 TMCC1O94876 653 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 HLA-EP13747 358 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 HOXB2P14652 356 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 CCNCP24863 283 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 NOMO1Q15155 1222 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 HNRNPA1L2Q32P51 320 aaKnown RBP16.3■□□□□ 0.2
CLN6-216ENST00000636876 TMCO4Q5TGY1 634 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 C22orf39Q6P5X5 142 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 NYAP1Q6ZVC0 841 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 SYT13Q7L8C5 426 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 METTL3Q86U44 580 aaKnown RBP16.3■□□□□ 0.2
CLN6-216ENST00000636876 ALYREFQ86V81 257 aaKnown RBP16.3■□□□□ 0.2
CLN6-216ENST00000636876 CCNYQ8ND76 341 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 ACTL9Q8TC94 416 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 FATE1Q969F0 183 aa16.3■□□□□ 0.2
CLN6-216ENST00000636876 ISG20Q96AZ6 181 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms