RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ATP5BP06576 529 aaKnown RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 THBS1P07996 1170 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 RHOCP08134 193 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 TCF4P15884 667 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 GOT1P17174 413 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 DRD1P21728 446 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 CASQ1P31415 396 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 GJA4P35212 333 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 DEKP35659 375 aaKnown RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 GJC1P36383 396 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 HSPA9P38646 679 aaKnown RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 GNA12Q03113 381 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 SLC20A2Q08357 652 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 KLF1Q13351 362 aaPredicted RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 GRM2Q14416 872 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 RFTN1Q14699 578 aaPredicted RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 MLF2Q15773 248 aaPredicted RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 CA9Q16790 459 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 ANO4Q32M45 955 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 RAB6CQ53S08 254 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 ARTNQ5T4W7 220 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 AFMIDQ63HM1 303 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 NCBP2-AS2Q69YL0 99 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 TXNRD3NBQ6F5E7 133 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 GRAMD4Q6IC98 578 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 CXorf57Q6NSI4 855 aaKnown RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 RWDD4Q6NW29 188 aaKnown RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 RFWD3Q6PCD5 774 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 DRICH1Q6PGQ1 229 aaPredicted RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 MFSD7Q6UXD7 560 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 TRMT11Q7Z4G4 463 aaKnown RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 BBS5Q8N3I7 341 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 TERB1Q8NA31 727 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 KIF18AQ8NI77 898 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 PCDH19Q8TAB3 1148 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 ACTRT1Q8TDG2 376 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 RAPGEF5Q92565 580 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 KRT35Q92764 455 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 P3H4Q92791 437 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 WBP2Q969T9 261 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 C16orf45Q96MC5 204 aaPredicted RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 RUNDC3BQ96NL0 473 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 LRRC3BQ96PB8 259 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 TSGA13Q96PP4 275 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 PPP1R2P1Q96PQ5 205 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 OSBPL9Q96SU4 736 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 VAT1Q99536 393 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 OSBPL8Q9BZF1 889 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 PLA2G2FQ9BZM2 168 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 RAB6CQ9H0N0 254 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 GOLPH3Q9H4A6 298 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 EBF3Q9H4W6 596 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 LRRC19Q9H756 370 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 FBRSQ9HAH7 460 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 PRDM6Q9NQX0 595 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 DNAJC17Q9NVM6 304 aaKnown RBP6.88□□□□□ -1.31
UPF3B-205ENST00000636792 DEC1Q9P2X7 70 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 GGA2Q9UJY4 613 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 HPCAL4Q9UM19 191 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 SLC8A2Q9UPR5 921 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 STARD13Q9Y3M8 1113 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 SAR1BQ9Y6B6 198 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 SHROOM3Q8TF72 1996 aa6.88□□□□□ -1.31
UPF3B-205ENST00000636792 SPECC1L-ADORA2AF8WAN1 911 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 FAM72CH0Y354 149 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 CCDC188H7C350 402 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 MCF2LO15068 1137 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 SRGAP2O75044 1071 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 TULP3O75386 442 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 APODP05090 189 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 SRPRAP08240 638 aaKnown RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PYGMP11217 842 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PABPC1P11940 636 aaKnown RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 HNRNPLP14866 589 aaKnown RBP eCLIP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 ARSAP15289 507 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 IL4RP24394 825 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 HLA-FP30511 346 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 NNMTP40261 264 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 OPRD1P41143 372 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 GRIA2P42262 883 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PAFAH1B1P43034 410 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 TNFRSF4P43489 277 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 CHRNA4P43681 627 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 MAPK8P45983 427 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 MARCKSL1P49006 195 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 VCPP55072 806 aaKnown RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 STARD6P59095 220 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 RPS24P62847 133 aaKnown RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 LMNB2Q03252 620 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 CKAP4Q07065 602 aaKnown RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 TNK2Q07912 1038 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 IL10RBQ08334 325 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 GALNT2Q10471 571 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 GRSF1Q12849 480 aaKnown RBP eCLIP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 SERINC3Q13530 473 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 DOC2BQ14184 412 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 LRRC32Q14392 662 aa6.87□□□□□ -1.31
UPF3B-205ENST00000636792 POLD3Q15054 466 aaPredicted RBP6.87□□□□□ -1.31
UPF3B-205ENST00000636792 PDK1Q15118 436 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms