RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 MAGEA13PA6NCF6 341 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 SEC22BO75396 215 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 USP1O94782 785 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 CFHP08603 1231 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 ALADP13716 330 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 ZNF7P17097 686 aaPredicted RBP14.41□□□□□ -0.1
GABRB3-219ENST00000636466 CRABP2P29373 138 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 ADRA1BP35368 520 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 SKIV2L2P42285 1042 aaKnown RBP14.41□□□□□ -0.1
GABRB3-219ENST00000636466 DUSP4Q13115 394 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 ADCK1Q86TW2 530 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 ALYREFQ86V81 257 aaKnown RBP14.41□□□□□ -0.1
GABRB3-219ENST00000636466 PLD3Q8IV08 490 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 HERC6Q8IVU3 1022 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 CNPY4Q8N129 248 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 LRRC52Q8N7C0 313 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 TRPC4APQ8TEL6 797 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 HIC2Q96JB3 615 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 DPY30Q9C005 99 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 PDZD7Q9H5P4 517 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 TRIM45Q9H8W5 580 aaPredicted RBP14.41□□□□□ -0.1
GABRB3-219ENST00000636466 CROTQ9UKG9 612 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 FBXO5Q9UKT4 447 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 SNX10Q9Y5X0 201 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 PDZK1P1A8MUH7 402 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 TLR5O60602 858 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 MMP3P08254 477 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 SLC16A1P53985 500 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 VAC14Q08AM6 782 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 PTPRNQ16849 979 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 PCID2Q5JVF3 399 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 SLC22A9Q8IVM8 553 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 PLD5Q8N7P1 536 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 HDAC10Q969S8 669 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 FAM120BQ96EK7 910 aaKnown RBP14.41□□□□□ -0.1
GABRB3-219ENST00000636466 PLEKHA8Q96JA3 519 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 COPS7BQ9H9Q2 264 aaPredicted RBP14.41□□□□□ -0.1
GABRB3-219ENST00000636466 XPR1Q9UBH6 696 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 NDUFAF1Q9Y375 327 aa14.41□□□□□ -0.1
GABRB3-219ENST00000636466 PLIN4Q96Q06 1357 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 GLTPD2A6NH11 291 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 AGRPO00253 132 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 H2AFYO75367 372 aaKnown RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 LMO2P25791 158 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 SP3Q02447 781 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 GALNT3Q14435 633 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 TARBP2Q15633 366 aaKnown RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 SLC1A5Q15758 541 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 SDE2Q6IQ49 451 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 DOK6Q6PKX4 331 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 LCLAT1Q6UWP7 414 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 UXTQ9UBK9 157 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 VIRMAQ69YN4 1812 aaKnown RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 RP1L1Q8IWN7 2480 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 FFAR3O14843 346 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 GPR42O15529 346 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 DHX15O43143 795 aaKnown RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 OR1D2P34982 312 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 KPNA1P52294 538 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 SLC10A6Q3KNW5 377 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 DET1Q7L5Y6 550 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 OTOP3Q7RTS5 596 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 PATL1Q86TB9 770 aaKnown RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 PTGR2Q8N8N7 351 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 HGH1Q9BTY7 390 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 ABCG8Q9H221 673 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 VPS45Q9NRW7 570 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 LINC00854A0A1B0GVQ3 168 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 LCA5LO95447 670 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 CTPS1P17812 591 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 CDKN2BP42772 138 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 GRIA4P48058 902 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 RPL14P50914 215 aaKnown RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 NRF1Q16656 503 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 FBXO48Q5FWF7 155 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 ARMC12Q5T9G4 340 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 TSHZ1Q6ZSZ6 1077 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 MARK2Q7KZI7 788 aaKnown RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 TBC1D19Q8N5T2 526 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 SLC4A11Q8NBS3 891 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 RNF145Q96MT1 663 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 ZNF112Q9UJU3 913 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 AGPSO00116 658 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 UNC5CO95185 931 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 RTN3O95197 1032 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 MAPK10P53779 464 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 WNT3AP56704 352 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 SMAD3P84022 425 aaKnown RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 SLC34A1Q06495 639 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 DYNC1I2Q13409 638 aaKnown RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 LDB1Q86U70 411 aaPredicted RBP14.4□□□□□ -0.1
GABRB3-219ENST00000636466 CPT1BQ92523 772 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 KLHL4Q9C0H6 718 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 TXNRD2Q9NNW7 524 aa14.4□□□□□ -0.1
GABRB3-219ENST00000636466 MFSD11O43934 449 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 SMPD1P17405 629 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 ME2P23368 584 aa14.39□□□□□ -0.11
GABRB3-219ENST00000636466 ACBD5Q5T8D3 534 aaPredicted RBP14.39□□□□□ -0.11
GABRB3-219ENST00000636466 IL27RAQ6UWB1 636 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms