RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 MT-CO1P00395 513 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 KRT1P04264 644 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 PTMAP06454 111 aaKnown RBP15.81■□□□□ 0.12
CLN6-211ENST00000635754 KDELR1P24390 212 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 SERPINB6P35237 376 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 SERPINH1P50454 418 aaKnown RBP15.81■□□□□ 0.12
CLN6-211ENST00000635754 COPAP53621 1224 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 MMRN1Q13201 1228 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 SERINC3Q13530 473 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 BYSLQ13895 437 aaKnown RBP15.81■□□□□ 0.12
CLN6-211ENST00000635754 C9orf64Q5T6V5 341 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 TMPRSS6Q8IU80 811 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 NPWQ8N729 165 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 FRS2Q8WU20 508 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 GAB3Q8WWW8 586 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 PRCCQ92733 491 aaPredicted RBP15.81■□□□□ 0.12
CLN6-211ENST00000635754 SIPA1Q96FS4 1042 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 SPACA7Q96KW9 195 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 CCDC114Q96M63 670 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 SLC6A17Q9H1V8 727 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 TRIM10Q9UDY6 481 aa15.81■□□□□ 0.12
CLN6-211ENST00000635754 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.81■□□□□ 0.12
CLN6-211ENST00000635754 K7ERQ8 282 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 DFFAO00273 331 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 ZNF217O75362 1048 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 CCDC175P0C221 793 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 ACADMP11310 421 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 VAV1P15498 845 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 IL4RP24394 825 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 ANKRD20A8PQ5CZ79 823 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 AFMIDQ63HM1 303 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 C22orf39Q6P5X5 142 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 Q6ZVU0 165 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 CEP68Q76N32 757 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 METTL3Q86U44 580 aaKnown RBP15.8■□□□□ 0.12
CLN6-211ENST00000635754 VSIG1Q86XK7 387 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 CACUL1Q86Y37 369 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 KIAA1524Q8TCG1 905 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 RAPGEF5Q92565 580 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 PTPRN2Q92932 1015 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 CEP44Q9C0F1 390 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 SLC39A8Q9C0K1 460 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 KLC2Q9H0B6 622 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 SEMA4AQ9H3S1 761 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 ETNK2Q9NVF9 386 aa15.8■□□□□ 0.12
CLN6-211ENST00000635754 A0A0U1RQJ8 604 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 ZNF487B1APH4 448 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 SMAD6O43541 496 aaKnown RBP15.79■□□□□ 0.12
CLN6-211ENST00000635754 HRO43593 1189 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 KRT86O43790 486 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 BNIP3LO60238 219 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 PAPOLAP51003 745 aaKnown RBP15.79■□□□□ 0.12
CLN6-211ENST00000635754 SRSF5Q13243 272 aaKnown RBP15.79■□□□□ 0.12
CLN6-211ENST00000635754 ELAVL3Q14576 367 aaKnown RBP15.79■□□□□ 0.12
CLN6-211ENST00000635754 ZNF776Q68DI1 518 aaPredicted RBP15.79■□□□□ 0.12
CLN6-211ENST00000635754 DSG4Q86SJ6 1040 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 ARHGAP12Q8IWW6 846 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 SYCE1Q8N0S2 351 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 STK40Q8N2I9 435 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 PCDH20Q8N6Y1 951 aaKnown RBP15.79■□□□□ 0.12
CLN6-211ENST00000635754 OR8D1Q8WZ84 308 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 FAF2Q96CS3 445 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 PDLIM2Q96JY6 352 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 RSPH9Q9H1X1 276 aaPredicted RBP15.79■□□□□ 0.12
CLN6-211ENST00000635754 MFHAS1Q9Y4C4 1052 aa15.79■□□□□ 0.12
CLN6-211ENST00000635754 FARP1Q9Y4F1 1045 aaPredicted RBP15.79■□□□□ 0.12
CLN6-211ENST00000635754 GRID2IPA4D2P6 1211 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 CD160O95971 181 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 DNTTP04053 509 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 P2RY2P41231 377 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 RECQLP46063 649 aaPredicted RBP15.78■□□□□ 0.12
CLN6-211ENST00000635754 ZBTB16Q05516 673 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 SIM2Q14190 667 aaPredicted RBP15.78■□□□□ 0.12
CLN6-211ENST00000635754 TTC31Q49AM3 519 aaPredicted RBP15.78■□□□□ 0.12
CLN6-211ENST00000635754 LEKR1Q6ZMV7 388 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 C11orf74Q86VG3 221 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 PCDH19Q8TAB3 1148 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.78■□□□□ 0.12
CLN6-211ENST00000635754 CASKIN2Q8WXE0 1202 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 RLN3Q8WXF3 142 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 EPC1Q9H2F5 836 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 SP110Q9HB58 689 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 UBA2Q9UBT2 640 aaPredicted RBP15.78■□□□□ 0.12
CLN6-211ENST00000635754 INVSQ9Y283 1065 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 FCF1Q9Y324 198 aaKnown RBP15.78■□□□□ 0.12
CLN6-211ENST00000635754 SPAG17Q6Q759 2223 aa15.78■□□□□ 0.12
CLN6-211ENST00000635754 C3orf70A6NLC5 250 aaPredicted RBP15.77■□□□□ 0.12
CLN6-211ENST00000635754 ALOX15BO15296 676 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 PRAMEF11O60813 436 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 CTNNA1P35221 906 aaKnown RBP15.77■□□□□ 0.12
CLN6-211ENST00000635754 DNA2P51530 1060 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 RPS14P62263 151 aaKnown RBP15.77■□□□□ 0.12
CLN6-211ENST00000635754 PAFAH1B3Q15102 231 aaKnown RBP15.77■□□□□ 0.12
CLN6-211ENST00000635754 MAP7D1Q3KQU3 841 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 INO80DQ53TQ3 878 aaPredicted RBP15.77■□□□□ 0.12
CLN6-211ENST00000635754 NCBP2-AS2Q69YL0 99 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 PRR23BQ6ZRT6 265 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 MMAAQ8IVH4 418 aaKnown RBP15.77■□□□□ 0.12
CLN6-211ENST00000635754 KATNAL2Q8IYT4 538 aa15.77■□□□□ 0.12
CLN6-211ENST00000635754 RNF10Q8N5U6 811 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms