RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 TCF7P36402 384 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SERPINF1P36955 418 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 CPA2P48052 419 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 PXNP49023 591 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 PEX5P50542 639 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 ZNF41P51814 821 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 RAD23AP54725 363 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 KRTAP10-11P60412 298 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 BEX3Q00994 111 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 CCDC173Q0VFZ6 552 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 RESTQ13127 1097 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 FHL3Q13643 280 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TRADDQ15628 312 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 STK11Q15831 433 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 CLPPQ16740 277 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 IMMTQ16891 758 aaKnown RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 INSCQ1MX18 579 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 MGAT5BQ3V5L5 792 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 CD300EQ496F6 205 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 CTXN3Q4LDR2 81 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 METTL11BQ5VVY1 283 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SNX30Q5VWJ9 437 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 RRAGBQ5VZM2 374 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TTC19Q6DKK2 380 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SFRP4Q6FHJ7 346 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 PM20D1Q6GTS8 502 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TANGO2Q6ICL3 276 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 ACAD10Q6JQN1 1059 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 ARHGAP11AQ6P4F7 1023 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 USP17L6PQ6QN14 398 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 OLFM4Q6UX06 510 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TMEM108Q6UXF1 575 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 RGS9BPQ6ZS82 235 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TMTC3Q6ZXV5 915 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 RAB11FIP2Q7L804 512 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 KCTD20Q7Z5Y7 419 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 GLRX5Q86SX6 157 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TRIM74Q86UV6 250 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TRIM73Q86UV7 250 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 KRT73Q86Y46 540 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 PEX5LQ8IYB4 626 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 THNSL1Q8IYQ7 743 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 KRT222Q8N1A0 295 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TCP11L2Q8N4U5 519 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 FAM71DQ8N9W8 422 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 KCTD6Q8NC69 237 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 CPEB3Q8NE35 698 aaKnown RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 ANKRD20A12PQ8NF67 263 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 OR52K1Q8NGK4 314 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 BPIFB1Q8TDL5 484 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 NTN5Q8WTR8 489 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SEPT1Q8WYJ6 367 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SGCDQ92629 289 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 ZUFSPQ96AP4 578 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 EPSTI1Q96J88 318 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 FEM1CQ96JP0 617 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SNX27Q96L92 541 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 FAM227BQ96M60 508 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 AK8Q96MA6 479 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 LENG8Q96PV6 779 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 ALOXE3Q9BYJ1 711 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 ACPTQ9BZG2 426 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 AMBRA1Q9C0C7 1298 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 B3GNT4Q9C0J1 378 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 PAIP1Q9H074 479 aaKnown RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 STMN4Q9H169 189 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TAOK3Q9H2K8 898 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 FAM83DQ9H4H8 585 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 EHD1Q9H4M9 534 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 PRDM13Q9H4Q3 707 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 RABEP2Q9H5N1 569 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TASP1Q9H6P5 420 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 CXorf36Q9H7Y0 433 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SYNPO2LQ9H987 977 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 GALNT9Q9HCQ5 603 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 MED4Q9NPJ6 270 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 GLRX2Q9NS18 164 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 DECR2Q9NUI1 292 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TBC1D23Q9NUY8 699 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 AATFQ9NY61 560 aaKnown RBP eCLIP3.11□□□□□ -1.919e-9■■□□□ 13.1
PSPC1-208ENST00000635562 RGL1Q9NZL6 768 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 ACTR3BQ9P1U1 418 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 IGSF9Q9P2J2 1179 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SUCLA2Q9P2R7 463 aaPredicted RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SRP68Q9UHB9 627 aaKnown RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 VPS51Q9UID3 782 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 TEKT2Q9UIF3 430 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SLC39A10Q9ULF5 831 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 RIMKLBQ9ULI2 386 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 ARHGAP26Q9UNA1 814 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 EXOC7Q9UPT5 735 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 MTO1Q9Y2Z2 717 aaKnown RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 CHTOPQ9Y3Y2 248 aaKnown RBP3.11□□□□□ -1.91
PSPC1-208ENST00000635562 SESN1Q9Y6P5 492 aa3.11□□□□□ -1.91
PSPC1-208ENST00000635562 PEG3Q9GZU2 1588 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CENPVL1A0A0U1RR11 272 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 ARHGAP10A1A4S6 786 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CCDC151A5D8V7 595 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 ZSCAN5CA6NGD5 496 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 AQP7P3A6NL99 342 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms