RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 SIGLEC16A6NMB1 481 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 CNOT3O75175 753 aaKnown RBP14.34□□□□□ -0.11
UBE3A-220ENST00000630424 NTRK1P04629 796 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 CCNB1P14635 433 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 C16orf72Q14CZ0 275 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 HAS1Q92839 578 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 SEMA4BQ9NPR2 832 aaPredicted RBP14.34□□□□□ -0.11
UBE3A-220ENST00000630424 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.34□□□□□ -0.11
UBE3A-220ENST00000630424 LINC00854A0A1B0GVQ3 168 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 CHURC1-FNTBB4DL54 471 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 GLI1P08151 1106 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 SLC35G4P0C7Q5 338 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 PAX3P23760 479 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 CCND1P24385 295 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 WASP42768 502 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 C21orf59P57076 290 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 SNAP47Q5SQN1 464 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 PSTKQ8IV42 348 aaKnown RBP14.34□□□□□ -0.11
UBE3A-220ENST00000630424 GLIS3Q8NEA6 775 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 SNRNP25Q9BV90 132 aaKnown RBP14.34□□□□□ -0.11
UBE3A-220ENST00000630424 COMMD8Q9NX08 183 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 GULP1Q9UBP9 304 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 OR10H1Q9Y4A9 318 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 PCDHB9Q9Y5E1 797 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 PCDHGA4Q9Y5G9 962 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 PTCH2Q9Y6C5 1203 aa14.34□□□□□ -0.11
UBE3A-220ENST00000630424 A0A087X0B3 334 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 NEDD8-MDP1E9PL57 170 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 CXCR2P25025 360 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 MAXP61244 160 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 RCN1Q15293 331 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 PFKFB4Q16877 469 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 C12orf29Q8N999 325 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 ATAD1Q8NBU5 361 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 SPPL2BQ8TCT7 592 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 OR8D1Q8WZ84 308 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 APBB2Q92870 758 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 ZBTB10Q96DT7 871 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 ADI1Q9BV57 179 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 PRDM12Q9H4Q4 367 aa14.33□□□□□ -0.11
UBE3A-220ENST00000630424 RGS14O43566 566 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 CTPS1P17812 591 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 HPCAL1P37235 193 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 SLC1A6P48664 564 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 DYNC1I2Q13409 638 aaKnown RBP14.33□□□□□ -0.12
UBE3A-220ENST00000630424 DPYSL3Q14195 570 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 ZNHIT3Q15649 155 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-220ENST00000630424 KCNA10Q16322 511 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 PKN2Q16513 984 aaKnown RBP14.33□□□□□ -0.12
UBE3A-220ENST00000630424 SLC24A5Q71RS6 500 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 SCUBE1Q8IWY4 988 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 IL22Q9GZX6 179 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 SLC24A3Q9HC58 644 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 ADAM28Q9UKQ2 775 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 A0A0A0MRY4 1105 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 CACNB4O00305 520 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-220ENST00000630424 VAV1P15498 845 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 PAICSP22234 425 aaKnown RBP14.33□□□□□ -0.12
UBE3A-220ENST00000630424 ZNF143P52747 638 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-220ENST00000630424 IRX1P78414 480 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-220ENST00000630424 PCID2Q5JVF3 399 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 ALKBH2Q6NS38 261 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 PPTC7Q8NI37 304 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 TCP10LQ8TDR4 215 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 ATL1Q8WXF7 558 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 SPATA13Q96N96 652 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 BTBD9Q96Q07 612 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 CFAP97Q9P2B7 532 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 ZMYND8Q9ULU4 1186 aaPredicted RBP14.33□□□□□ -0.12
UBE3A-220ENST00000630424 TNPO3Q9Y5L0 923 aaKnown RBP14.33□□□□□ -0.12
UBE3A-220ENST00000630424 CES2O00748 559 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 INPP4BO15327 924 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 OR10H2O60403 315 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 COX7A2P14406 83 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 GRM5P41594 1212 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 CRADDP78560 199 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 PTPRNQ16849 979 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 C16orf62Q7Z3J2 963 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 ANKRD23Q86SG2 305 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 FAM35AQ86V20 835 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 FAM228AQ86W67 206 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 OR6K2Q8NGY2 324 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 UBE2E3Q969T4 207 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 ALG9Q9H6U8 611 aa14.33□□□□□ -0.12
UBE3A-220ENST00000630424 SLC25A14O95258 325 aaPredicted RBP14.32□□□□□ -0.12
UBE3A-220ENST00000630424 C1DQ13901 141 aaKnown RBP14.32□□□□□ -0.12
UBE3A-220ENST00000630424 OTUD3Q5T2D3 398 aaPredicted RBP14.32□□□□□ -0.12
UBE3A-220ENST00000630424 ZBTB49Q6ZSB9 765 aa14.32□□□□□ -0.12
UBE3A-220ENST00000630424 FAM20CQ8IXL6 584 aa14.32□□□□□ -0.12
UBE3A-220ENST00000630424 CHST7Q9NS84 486 aa14.32□□□□□ -0.12
UBE3A-220ENST00000630424 LIMD1Q9UGP4 676 aa14.32□□□□□ -0.12
UBE3A-220ENST00000630424 PADI3Q9ULW8 664 aa14.32□□□□□ -0.12
UBE3A-220ENST00000630424 FASTKQ14296 549 aaKnown RBP14.32□□□□□ -0.12
UBE3A-220ENST00000630424 CNSTQ6PJW8 725 aa14.32□□□□□ -0.12
UBE3A-220ENST00000630424 MON1AQ86VX9 555 aa14.32□□□□□ -0.12
UBE3A-220ENST00000630424 KYQ8NBH2 561 aa14.32□□□□□ -0.12
UBE3A-220ENST00000630424 WDR36Q8NI36 951 aaKnown RBP14.32□□□□□ -0.12
UBE3A-220ENST00000630424 STAG3L4Q8TBR4 150 aa14.32□□□□□ -0.12
UBE3A-220ENST00000630424 PROX1Q92786 737 aa14.32□□□□□ -0.12
UBE3A-220ENST00000630424 POMKQ9H5K3 350 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms