RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 POLD3Q15054 466 aaPredicted RBP13.2□□□□□ -0.3
RAB5B-211ENST00000628569 PLPP4Q5VZY2 271 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 ALG1LQ6GMV1 187 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 ZNF783Q6ZMS7 281 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 SPATA31D4Q6ZUB0 917 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 SETD3Q86TU7 594 aaPredicted RBP13.2□□□□□ -0.3
RAB5B-211ENST00000628569 TRABD2AQ86V40 505 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 CYP4X1Q8N118 509 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 MPP5Q8N3R9 675 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 MZB1Q8WU39 189 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 DCAKDQ8WVC6 231 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 SLC44A1Q8WWI5 657 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 MRPS31Q92665 395 aaKnown RBP13.2□□□□□ -0.3
RAB5B-211ENST00000628569 WBP2Q969T9 261 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 TADA1Q96BN2 335 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 SLC22A12Q96S37 553 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 PAFAH2Q99487 392 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 SLC25A51Q9H1U9 297 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 GKN1Q9NS71 199 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 RBM22Q9NW64 420 aaKnown RBP eCLIP13.2□□□□□ -0.3
RAB5B-211ENST00000628569 MOCS1Q9NZB8 636 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 ZNF180Q9UJW8 692 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 ZNF510Q9Y2H8 683 aa13.2□□□□□ -0.3
RAB5B-211ENST00000628569 ILVBLA1L0T0 632 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 MAGEB16A2A368 324 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 POC1B-GALNT4F8VUJ3 575 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 J3KR12 359 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 ARHGEF15O94989 841 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 HNRNPA1P09651 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
RAB5B-211ENST00000628569 HDCP19113 662 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 DDX6P26196 483 aaKnown RBP eCLIP13.19□□□□□ -0.3
RAB5B-211ENST00000628569 MGAT1P26572 445 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 HOXD9P28356 352 aaPredicted RBP13.19□□□□□ -0.3
RAB5B-211ENST00000628569 ATP1A2P50993 1020 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 SMAD3P84022 425 aaKnown RBP13.19□□□□□ -0.3
RAB5B-211ENST00000628569 GNA12Q03113 381 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 CDH17Q12864 832 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 MPP3Q13368 585 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 MTM1Q13496 603 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 NAB1Q13506 487 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 SLC14A2Q15849 920 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 PPM1LQ5SGD2 360 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 RNF43Q68DV7 783 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 RFWD3Q6PCD5 774 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 CAPN12Q6ZSI9 719 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 HTR3DQ70Z44 454 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 OTOP3Q7RTS5 596 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
RAB5B-211ENST00000628569 CPXM2Q8N436 756 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 LEMD2Q8NC56 503 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 SLC22A17Q8WUG5 538 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 TTC17Q96AE7 1141 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 IMP4Q96G21 291 aaKnown RBP13.19□□□□□ -0.3
RAB5B-211ENST00000628569 CFAP36Q96G28 342 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 GCNAQ96QF7 691 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 ACE2Q9BYF1 805 aaPredicted RBP13.19□□□□□ -0.3
RAB5B-211ENST00000628569 IL22Q9GZX6 179 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 SP110Q9HB58 689 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 ARNT2Q9HBZ2 717 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 SSU72Q9NP77 194 aaKnown RBP13.19□□□□□ -0.3
RAB5B-211ENST00000628569 ASAH2Q9NR71 780 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 VPS45Q9NRW7 570 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 BFARQ9NZS9 450 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 ATG2AQ2TAZ0 1938 aa13.19□□□□□ -0.3
RAB5B-211ENST00000628569 F5H423 210 aaPredicted RBP13.18□□□□□ -0.3
RAB5B-211ENST00000628569 GRM6O15303 877 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 LPXNO60711 386 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 CA8P35219 290 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 MSH2P43246 934 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 ERVK-21P61565 698 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 RPS24P62847 133 aaKnown RBP13.18□□□□□ -0.3
RAB5B-211ENST00000628569 ZXDBP98169 803 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 CYP4F8P98187 520 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 SLC10A7Q0GE19 358 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 RFTN1Q14699 578 aaPredicted RBP13.18□□□□□ -0.3
RAB5B-211ENST00000628569 EFTUD2Q15029 972 aaKnown RBP eCLIP13.18□□□□□ -0.3
RAB5B-211ENST00000628569 TMED2Q15363 201 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 KBTBD12Q3ZCT8 623 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 SPANXN3Q5MJ09 141 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 TMCO4Q5TGY1 634 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 MARC1Q5VT66 337 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 TXNDC8Q6A555 127 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 KDELC1Q6UW63 502 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 PRPF39Q86UA1 669 aaKnown RBP13.18□□□□□ -0.3
RAB5B-211ENST00000628569 TMEM135Q86UB9 458 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 HS6ST3Q8IZP7 471 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 ARL14EPQ8N8R7 260 aaPredicted RBP13.18□□□□□ -0.3
RAB5B-211ENST00000628569 OR52K1Q8NGK4 314 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 USP33Q8TEY7 942 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 NSMCE1Q8WV22 266 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 TRPC7Q9HCX4 862 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 ATP13A1Q9HD20 1204 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 SYBUQ9NX95 663 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 CPQQ9Y646 472 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 MAD1L1Q9Y6D9 718 aa13.18□□□□□ -0.3
RAB5B-211ENST00000628569 TRAV19A0A0A6YYK7 116 aa13.17□□□□□ -0.3
RAB5B-211ENST00000628569 FAM237BA0A1B0GVD1 139 aa13.17□□□□□ -0.3
RAB5B-211ENST00000628569 KDELR3O43731 214 aa13.17□□□□□ -0.3
RAB5B-211ENST00000628569 CLASP2O75122 1294 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms