RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 NCOA7Q8NI08 942 aa8.49□□□□□ -1.05
SMN2-214ENST00000626847 PRPF31Q8WWY3 499 aaKnown RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 JPH3Q8WXH2 748 aaPredicted RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 ZNF486Q96H40 463 aaPredicted RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 PRICKLE1Q96MT3 831 aaPredicted RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 ZIM3Q96PE6 472 aa8.49□□□□□ -1.05
SMN2-214ENST00000626847 C17orf62Q9BQA9 187 aa8.49□□□□□ -1.05
SMN2-214ENST00000626847 ZNF717Q9BY31 904 aaPredicted RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 MRPS26Q9BYN8 205 aaKnown RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 SLC6A17Q9H1V8 727 aa8.49□□□□□ -1.05
SMN2-214ENST00000626847 PABPC3Q9H361 631 aaKnown RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 NCOA5Q9HCD5 579 aaKnown RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 KIAA1586Q9HCI6 787 aa8.49□□□□□ -1.05
SMN2-214ENST00000626847 RAVER2Q9HCJ3 691 aaKnown RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 HOMER2Q9NSB8 354 aa8.49□□□□□ -1.05
SMN2-214ENST00000626847 C20orf96Q9NUD7 363 aaPredicted RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 SUCOQ9UBS9 1254 aaKnown RBP8.49□□□□□ -1.05
SMN2-214ENST00000626847 PCOLCE2Q9UKZ9 415 aa8.49□□□□□ -1.05
SMN2-214ENST00000626847 SPATA2Q9UM82 520 aa8.49□□□□□ -1.05
SMN2-214ENST00000626847 ABCC4O15439 1325 aa8.49□□□□□ -1.05
SMN2-214ENST00000626847 LOC390937A0A1W2PQ73 354 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 PCP4L1A6NKN8 68 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 A8MX80 341 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 CHURC1-FNTBB4DL54 471 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 TCP11X1B4DZS4 312 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 SHISA8B8ZZ34 492 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 RNF103O00237 685 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 CDH16O75309 829 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 LRRN2O75325 713 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 TRIM16O95361 564 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 PGRP06401 933 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 ANXA6P08133 673 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 HMOX1P09601 288 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 SELPP16109 830 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 ALOX12P18054 663 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 F8A1P23610 371 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 GUCY1A2P33402 732 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 TRHRP34981 398 aaPredicted RBP8.48□□□□□ -1.05
SMN2-214ENST00000626847 POU3F4P49335 361 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 AIF1P55008 147 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 SLC12A2P55011 1212 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 PSMD4P55036 377 aaKnown RBP8.48□□□□□ -1.05
SMN2-214ENST00000626847 IRX4P78413 519 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 DOC2AQ14183 400 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 RFTN1Q14699 578 aaPredicted RBP8.48□□□□□ -1.05
SMN2-214ENST00000626847 SNX17Q15036 470 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 MAPK6Q16659 721 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 DGKDQ16760 1214 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 ZNF569Q5MCW4 686 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 BRMS1LQ5PSV4 323 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 PRMT9Q6P2P2 845 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 UTS2BQ765I0 119 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 TAS2R42Q7RTR8 314 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 HPS6Q86YV9 775 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 SP8Q8IXZ3 490 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 KIAA2013Q8IYS2 634 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 C7orf61Q8IZ16 206 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 FAM109AQ8N4B1 249 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 FBXL6Q8N531 539 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 PLD5Q8N7P1 536 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 C19orf47Q8N9M1 422 aaKnown RBP8.48□□□□□ -1.05
SMN2-214ENST00000626847 KCTD4Q8WVF5 259 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 ASZ1Q8WWH4 475 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 GRAMD1AQ96CP6 724 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 ZDHHC12Q96GR4 267 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 SNX18Q96RF0 628 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 RIT2Q99578 217 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 DNAJC7Q99615 494 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 TTYH3Q9C0H2 523 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 POLR1EQ9GZS1 481 aaKnown RBP8.48□□□□□ -1.05
SMN2-214ENST00000626847 NAPBQ9H115 298 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 CUEDC2Q9H467 287 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 USP29Q9HBJ7 922 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 RRN3Q9NYV6 651 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 NYAP2Q9P242 653 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 STX18Q9P2W9 335 aaKnown RBP8.48□□□□□ -1.05
SMN2-214ENST00000626847 ENOPH1Q9UHY7 261 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 IPO11Q9UI26 975 aaKnown RBP8.48□□□□□ -1.05
SMN2-214ENST00000626847 RCOR1Q9UKL0 485 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 DIMT1Q9UNQ2 313 aaKnown RBP8.48□□□□□ -1.05
SMN2-214ENST00000626847 GINS2Q9Y248 185 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 VWA7Q9Y334 891 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 MSRB2Q9Y3D2 182 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 DAGLAQ9Y4D2 1042 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 SLC12A7Q9Y666 1083 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 CAPN6Q9Y6Q1 641 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 DUOX1Q9NRD9 1551 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 SYNGAP1Q96PV0 1343 aa8.48□□□□□ -1.05
SMN2-214ENST00000626847 A0A1B0GTQ1 180 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 A0A1W2PQH9 124 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 ZNF98A6NK75 572 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 A8MXQ7 604 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 F8W031 263 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 NDUFS8O00217 210 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 TRAFD1O14545 582 aaPredicted RBP8.47□□□□□ -1.05
SMN2-214ENST00000626847 TOR1AO14656 332 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 PIP5K1CO60331 668 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 OPHN1O60890 802 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 SULT1C4O75897 302 aa8.47□□□□□ -1.05
SMN2-214ENST00000626847 PIGNO95427 931 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms