RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 SGK2Q9HBY8 427 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 FBXL12Q9NXK8 326 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 UVRAGQ9P2Y5 699 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 ANAPC7Q9UJX3 599 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 PILRBQ9UKJ0 227 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 NEU3Q9UQ49 428 aa17.12■□□□□ 0.33
UBE3D-208ENST00000626828 METTL12A8MUP2 240 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 EEF2KO00418 725 aaKnown RBP17.11■□□□□ 0.33
UBE3D-208ENST00000626828 KHNYNO15037 678 aaKnown RBP17.11■□□□□ 0.33
UBE3D-208ENST00000626828 ALOX15BO15296 676 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 DAPK3O43293 454 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 KDELR3O43731 214 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 IL1BP01584 269 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 VAV1P15498 845 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 GLDCP23378 1020 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 ITPKAP23677 461 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 ACVRL1P37023 503 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 GEMIN4P57678 1058 aaKnown RBP17.11■□□□□ 0.33
UBE3D-208ENST00000626828 TPI1P60174 286 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 LINGO4Q6UY18 593 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 RABEPKQ7Z6M1 372 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 SLC41A1Q8IVJ1 513 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 UMODL1-AS1Q8N2C9 162 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 CEP76Q8TAP6 659 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 ARHGEF26Q96DR7 871 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 HSPA12BQ96MM6 686 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 PEBP4Q96S96 227 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 OMDQ99983 421 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 CEP44Q9C0F1 390 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 GPATCH2LQ9NWQ4 482 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 CTTNBP2NLQ9P2B4 639 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 LCMT1Q9UIC8 334 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 PPM1HQ9ULR3 514 aa17.11■□□□□ 0.33
UBE3D-208ENST00000626828 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.11■□□□□ 0.33
UBE3D-208ENST00000626828 CFAP54Q96N23 3096 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 ZSCAN5CA6NGD5 496 aaPredicted RBP17.1■□□□□ 0.33
UBE3D-208ENST00000626828 K7ERQ8 282 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 MID1O15344 667 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 SMAD6O43541 496 aaKnown RBP17.1■□□□□ 0.33
UBE3D-208ENST00000626828 GOT1P17174 413 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 ACSL1P33121 698 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 RECQLP46063 649 aaPredicted RBP17.1■□□□□ 0.33
UBE3D-208ENST00000626828 SF3A2Q15428 464 aaKnown RBP17.1■□□□□ 0.33
UBE3D-208ENST00000626828 CA9Q16790 459 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 DUOXA1Q1HG43 343 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 Q6ZVU0 165 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 RGL4Q8IZJ4 473 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 TC2NQ8N9U0 490 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 DNASE2BQ8WZ79 361 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 NEUROG2Q9H2A3 272 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 TMEM74BQ9NUR3 256 aa17.1■□□□□ 0.33
UBE3D-208ENST00000626828 EVLQ9UI08 416 aaPredicted RBP17.1■□□□□ 0.33
UBE3D-208ENST00000626828 BNIP3LO60238 219 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 RNASEH2AO75792 299 aaKnown RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 SEMA4FO95754 770 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 TMEM253P0C7T8 217 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 CHRNA3P32297 505 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 PSMD8P48556 350 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 SERPINH1P50454 418 aaKnown RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 NDST2P52849 883 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 ARF5P84085 180 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 HADHQ16836 314 aaKnown RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 PARP15Q460N3 678 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 AASDHQ4L235 1098 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 PPP6R3Q5H9R7 873 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 PEAR1Q5VY43 1037 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 CYP4V2Q6ZWL3 525 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 ZNF354CQ86Y25 554 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 PLPP6Q8IY26 295 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 HDDC3Q8N4P3 179 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 PCDH20Q8N6Y1 951 aaKnown RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 TMIEQ8NEW7 156 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 OR2A12Q8NGT7 310 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 ZNF564Q8TBZ8 553 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 ISG20Q96AZ6 181 aaKnown RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 BTBD6Q96KE9 485 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 KCTD15Q96SI1 283 aaPredicted RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 PACSIN1Q9BY11 444 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 SMOC1Q9H4F8 434 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 NOL6Q9H6R4 1146 aaKnown RBP17.09■□□□□ 0.33
UBE3D-208ENST00000626828 SUSD2Q9UGT4 822 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 FZD4Q9ULV1 537 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 CACNA1EQ15878 2313 aa17.09■□□□□ 0.33
UBE3D-208ENST00000626828 A0A1W2PP55 124 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 MEI4A8MW99 385 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 RASA4BC9J798 803 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 C1QTNF3-AMACRE9PGA6 284 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 RASA4O43374 803 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 RARAP10276 462 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 GNSP15586 552 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 ERCC2P18074 760 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 IL1R2P27930 398 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 ID4P47928 161 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 IRX4P78413 519 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 CCDC15Q0P6D6 951 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 CARD16Q5EG05 197 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 DCAF12L1Q5VU92 463 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 C22orf39Q6P5X5 142 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 SLC23A3Q6PIS1 610 aa17.08■□□□□ 0.32
UBE3D-208ENST00000626828 RFX8Q6ZV50 586 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms