RNA–Protein interactions for RNA: ENST00000626422.2

MECP2-215, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-215	ENST00000626422	TMEM110	Q86TL2	294 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	HORMAD1	Q86X24	394 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	DEFB106A	Q8N104	65 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	EHBP1	Q8NDI1	1231 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	OR2A12	Q8NGT7	310 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	IFI44	Q8TCB0	444 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	SNRNP27	Q8WVK2	155 aa	Known RBP	12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	RPRD1A	Q96P16	312 aa	Predicted RBP	12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	PSMB7	Q99436	277 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	TSG101	Q99816	390 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	NLGN3	Q9NZ94	848 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	KLF15	Q9UIH9	416 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	SATB2	Q9UPW6	733 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	CNTN6	Q9UQ52	1028 aa		12.82	□□□□□ -0.36
MECP2-215	ENST00000626422	RP1	P56715	2156 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	COL12A1	Q99715	3063 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	POM121B	A6NF01	834 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	CAPN8	A6NHC0	703 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	KPNA3	O00505	521 aa	Predicted RBP	12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	SCAMP1	O15126	338 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	PMM2	O15305	246 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	RAD51B	O15315	384 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	SART1	O43290	800 aa	Known RBP	12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	SNAP91	O60641	907 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	CNTN5	O94779	1100 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	GP1BA	P07359	652 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	C6	P13671	934 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	CHRNA3	P32297	505 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	ACADSB	P45954	432 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	UCN	P55089	124 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	SKOR1	P84550	965 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	FGL2	Q14314	439 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	FZD2	Q14332	565 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	HS1BP3	Q53T59	392 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	RABGAP1L	Q5R372	815 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	TPRG1L	Q5T0D9	272 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	CRTC1	Q6UUV9	634 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422		Q6ZSR6	202 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	ABI3BP	Q7Z7G0	1075 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	WDTC1	Q8N5D0	677 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	MAPK15	Q8TD08	544 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	STK32A	Q8WU08	396 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	ZNF606	Q8WXB4	792 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	ATXN7L3B	Q96GX2	97 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	DPH1	Q9BZG8	443 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	ABCG4	Q9H172	646 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	THAP9	Q9H5L6	903 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	FAM204A	Q9H8W3	233 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	GDPD2	Q9HCC8	539 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	ANLN	Q9NQW6	1124 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	DNAJC28	Q9NX36	388 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	VPS28	Q9UK41	221 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	ENTPD2	Q9Y5L3	495 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	HS3ST4	Q9Y661	456 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	BSN	Q9UPA5	3926 aa		12.81	□□□□□ -0.36
MECP2-215	ENST00000626422	DOCK4	Q8N1I0	1966 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	NAV2	Q8IVL1	2488 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	CPED1	A4D0V7	1026 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422		I6L893	689 aa	Predicted RBP	12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	GRAP2	O75791	330 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	LETM1	O95202	739 aa	Predicted RBP	12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	PCDH8	O95206	1070 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	CD44	P16070	742 aa	Known RBP	12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	HNRNPA2B1	P22626	353 aa	Known RBP	12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	RRM1	P23921	792 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	AKT2	P31751	481 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	GCNT1	Q02742	428 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	DRAP1	Q14919	205 aa	Predicted RBP	12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	CDKN3	Q16667	212 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	TMEM259	Q4ZIN3	620 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	ARSI	Q5FYB1	569 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	ISM2	Q6H9L7	571 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	NEK5	Q6P3R8	708 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	GUSBP11	Q6P575	273 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	HSCB	Q8IWL3	235 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	TMIE	Q8NEW7	156 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	RNF34	Q969K3	372 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	SLC46A1	Q96NT5	459 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	GPR27	Q9NS67	375 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	DDIT4	Q9NX09	232 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	SLC12A6	Q9UHW9	1150 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	HS3ST2	Q9Y278	367 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	TBC1D30	Q9Y2I9	924 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	SNX10	Q9Y5X0	201 aa		12.8	□□□□□ -0.36
MECP2-215	ENST00000626422	UBR5	O95071	2799 aa	Predicted RBP	12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	EFS	O43281	561 aa		12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	LZTS3	O60299	673 aa	Predicted RBP	12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	PAGE1	O75459	146 aa		12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	ZNF821	O75541	412 aa	Predicted RBP	12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	PAK4	O96013	591 aa	Predicted RBP	12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	ALPPL2	P10696	532 aa		12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	KRT5	P13647	590 aa		12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	CCR1	P32246	355 aa		12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	OXCT1	P55809	520 aa		12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	CDK17	Q00537	523 aa		12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	LRRC63	Q05C16	580 aa		12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	C1QBP	Q07021	282 aa	Known RBP	12.79	□□□□□ -0.36
MECP2-215	ENST00000626422	ZNF177	Q13360	481 aa	Predicted RBP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms