RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 ERVW-1Q9UQF0 538 aa7.41□□□□□ -1.22
NPLOC4-221ENST00000625705 STARD13Q9Y3M8 1113 aa7.41□□□□□ -1.22
NPLOC4-221ENST00000625705 ATG2BQ96BY7 2078 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 A0A0A0MRY4 1105 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 ANTXRLA6NF34 631 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 EIF3CLB5ME19 914 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 WASH3PC4AMC7 463 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 K7ESF4 209 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 FGF10O15520 208 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 SPOPO43791 374 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 RAMP2O60895 175 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 RNASEH1O60930 286 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 ADAM23O75077 832 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 LRCH4O75427 683 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 NDUFA10O95299 355 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 PAPSS2O95340 614 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 PTMAP06454 111 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 SRPRAP08240 638 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 HLA-EP13747 358 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 HNRNPLP14866 589 aaKnown RBP eCLIP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 HTR7P34969 479 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 PCK1P35558 622 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 RECQLP46063 649 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 MAPKAPK2P49137 400 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 GEMIN4P57678 1058 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 GNA12Q03113 381 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 DMWDQ09019 674 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 ZNF252P-AS1Q0IIN9 211 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 BYSLQ13895 437 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 SIM2Q14190 667 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 ELF2Q15723 593 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 LPAL2Q16609 132 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 TTC31Q49AM3 519 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 KCNT1Q5JUK3 1230 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 DAB2IPQ5VWQ8 1189 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 TMEM215Q68D42 235 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 CXorf57Q6NSI4 855 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 RETSATQ6NUM9 610 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 BNIPLQ7Z465 357 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 WDR5BQ86VZ2 330 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 MAML2Q8IZL2 1156 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 PYROXD2Q8N2H3 581 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 RYBPQ8N488 228 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 PAF1Q8N7H5 531 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 DCAF4L2Q8NA75 395 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 ATP11CQ8NB49 1132 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 MDGA1Q8NFP4 955 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 OR7D4Q8NG98 312 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 SLC35G2Q8TBE7 412 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 PRCCQ92733 491 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 P2RY11Q96G91 374 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 RPL10LQ96L21 214 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 EIF3CQ99613 913 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 FEM1AQ9BSK4 669 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 CALN1Q9BXU9 219 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 PRDM16Q9HAZ2 1276 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 C2orf42Q9NWW7 574 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 THAP10Q9P2Z0 257 aaPredicted RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 NCDNQ9UBB6 729 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 PPARGC1AQ9UBK2 798 aaKnown RBP7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 SUN2Q9UH99 717 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 GMEB2Q9UKD1 530 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 INTUQ9ULD6 942 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 INVSQ9Y283 1065 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 PCDHA13Q9Y5I0 950 aa7.4□□□□□ -1.22
NPLOC4-221ENST00000625705 IGLV3-10A0A075B6K4 115 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 CCDC163A0A0D9SF12 145 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 EDDM13A0A1B0GTR0 161 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 ILVBLA1L0T0 632 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 DRGXA6NNA5 263 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 FAM72CH0Y354 149 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 I6L893 689 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 NDUFS2O75306 463 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 PROSCO94903 275 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 DNTTP04053 509 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 KRT7P08729 469 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 GABRG2P18507 467 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 HOXA6P31267 233 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 CNR2P34972 360 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 STK19P49842 368 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 DNA2P51530 1060 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 ZNF135P52742 658 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 CDH6P55285 790 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 NRG1Q02297 640 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 SRSF5Q13243 272 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 POLD3Q15054 466 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 ASTE1Q2TB18 679 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 BOLA3Q53S33 107 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 FAM72AQ5TYM5 149 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 ZNF776Q68DI1 518 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 FAM72DQ6L9T8 149 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 KIAA1211LQ6NV74 962 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 TMCO3Q6UWJ1 677 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 LINGO4Q6UY18 593 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 ZNF783Q6ZMS7 281 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 RFX8Q6ZV50 586 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 DSG4Q86SJ6 1040 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 C11orf74Q86VG3 221 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 FAM72BQ86X60 149 aa7.39□□□□□ -1.23
NPLOC4-221ENST00000625705 PSTKQ8IV42 348 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms