RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 OTOP3Q7RTS5 596 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 GPR142Q7Z601 462 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 HDAC11Q96DB2 347 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 TINF2Q9BSI4 451 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 IL22Q9GZX6 179 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 TLK1Q9UKI8 766 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 TRHDEQ9UKU6 1024 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 RAD54BQ9Y620 910 aa11.46□□□□□ -0.57
VARS2-213ENST00000625423 H3BNX3 289 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 MATN2O00339 956 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 GABRDO14764 452 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 SBK3P0C264 359 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 PIK3R1P27986 724 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 GRIA4P48058 902 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 NUDT2P50583 147 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 LSM12Q3MHD2 195 aaKnown RBP11.46□□□□□ -0.58
VARS2-213ENST00000625423 IQSEC1Q6DN90 963 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 ITPRIPL1Q6GPH6 555 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 ACAD11Q709F0 780 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 KBTBD6Q86V97 674 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 TMEM151AQ8N4L1 468 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 USP33Q8TEY7 942 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 LENG1Q96BZ8 264 aaPredicted RBP11.46□□□□□ -0.58
VARS2-213ENST00000625423 COLEC11Q9BWP8 271 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 VCX3BQ9H321 246 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 OR12D3Q9UGF7 316 aa11.46□□□□□ -0.58
VARS2-213ENST00000625423 MYBPHLA2RUH7 354 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 FBXO21O94952 628 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 PIGNO95427 931 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 F2P00734 622 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 UQCRBP14927 111 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 HCAR3P49019 387 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 NUMBP49757 651 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 RPL14P50914 215 aaKnown RBP11.45□□□□□ -0.58
VARS2-213ENST00000625423 GALNT2Q10471 571 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 DLG1Q12959 904 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 MED21Q13503 144 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 USP10Q14694 798 aaKnown RBP11.45□□□□□ -0.58
VARS2-213ENST00000625423 ANO4Q32M45 955 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 ARL13BQ3SXY8 428 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 ARL13AQ5H913 290 aaPredicted RBP11.45□□□□□ -0.58
VARS2-213ENST00000625423 SNX32Q86XE0 403 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 ZMIZ2Q8NF64 920 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 GTF3C2Q8WUA4 911 aaPredicted RBP11.45□□□□□ -0.58
VARS2-213ENST00000625423 SCYL1Q96KG9 808 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 TEKT5Q96M29 485 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 C1QTNF1Q9BXJ1 281 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 NUF2Q9BZD4 464 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 TKTL2Q9H0I9 626 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 RAP2CQ9Y3L5 183 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 HDAC3O15379 428 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 H2AFYO75367 372 aaKnown RBP11.45□□□□□ -0.58
VARS2-213ENST00000625423 LRIG2O94898 1065 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 NAGLUP54802 743 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 CDH17Q12864 832 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 LIPMQ5VYY2 423 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 SEL1L3Q68CR1 1132 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 TWF2Q6IBS0 349 aaKnown RBP11.45□□□□□ -0.58
VARS2-213ENST00000625423 FAM35AQ86V20 835 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 ZC3HC1Q86WB0 502 aaKnown RBP11.45□□□□□ -0.58
VARS2-213ENST00000625423 GALNT15Q8N3T1 639 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 NPLOC4Q8TAT6 608 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 KCTD4Q8WVF5 259 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 PCED1BQ96HM7 432 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 SENP8Q96LD8 212 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 GPR22Q99680 433 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 FAM192AQ9GZU8 254 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 DRC3Q9H069 523 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 WDCPQ9H6R7 721 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 ZDHHC2Q9UIJ5 367 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 RUVBL2Q9Y230 463 aaKnown RBP11.45□□□□□ -0.58
VARS2-213ENST00000625423 MEIS3P2A8K0S8 358 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 BTBD19C9JJ37 291 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 MTSS1O43312 755 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 THRAP10827 490 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 TFEBP19484 476 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 LRPAP1P30533 357 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 GRAMD1BQ3KR37 738 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 ZYG11AQ6WRX3 759 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 SPATA22Q8NHS9 363 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 RHOBTB2Q9BYZ6 727 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 BRD8Q9H0E9 1235 aa11.45□□□□□ -0.58
VARS2-213ENST00000625423 RGSL1A5PLK6 1076 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 C9IYK1 514 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 GRID2O43424 1007 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 VCLP18206 1134 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 GABRB3P28472 473 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 GJA9P57773 515 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 MFSD10Q14728 455 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 INTS6LQ5JSJ4 861 aaKnown RBP11.44□□□□□ -0.58
VARS2-213ENST00000625423 TMEM198Q66K66 360 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 CWF19L1Q69YN2 538 aaKnown RBP11.44□□□□□ -0.58
VARS2-213ENST00000625423 SLC41A1Q8IVJ1 513 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 CNTD1Q8N815 330 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 ZSCAN18Q8TBC5 510 aaPredicted RBP11.44□□□□□ -0.58
VARS2-213ENST00000625423 TSNARE1Q96NA8 513 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 EPAS1Q99814 870 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 UNKQ9C0B0 810 aaKnown RBP11.44□□□□□ -0.58
VARS2-213ENST00000625423 CNGB3Q9NQW8 809 aa11.44□□□□□ -0.58
VARS2-213ENST00000625423 MID2Q9UJV3 735 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms