RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CES1P23141 567 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 OR1E1P30953 314 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 CDH4P55283 916 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 INSCQ1MX18 579 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 ANKRD20A4Q4UJ75 823 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 ARTNQ5T4W7 220 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 FOXR1Q6PIV2 292 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 SH2D5Q6ZV89 423 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 CHST9Q7L1S5 443 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 NLRP9Q7RTR0 991 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 HERC6Q8IVU3 1022 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 PPHLN1Q8NEY8 458 aaKnown RBP16.65■□□□□ 0.26
LDB3-208ENST00000623007 ZNF398Q8TD17 642 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 GPR152Q8TDT2 470 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 GORASP1Q9BQQ3 440 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 KDM4CQ9H3R0 1056 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 RABEP2Q9H5N1 569 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 ARNT2Q9HBZ2 717 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 MPP6Q9NZW5 540 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 DCDC2Q9UHG0 476 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 ARL2BPQ9Y2Y0 163 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 YIPF1Q9Y548 306 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 NR2E3Q9Y5X4 410 aa16.65■□□□□ 0.26
LDB3-208ENST00000623007 MYO18AQ92614 2054 aaKnown RBP16.64■□□□□ 0.25
LDB3-208ENST00000623007 KLF11O14901 512 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 TIMM44O43615 452 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 CLDN11O75508 207 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 SOAT2O75908 522 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 DHRS4L1P0CG22 281 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 HSPA1AP0DMV8 641 aaKnown RBP16.64■□□□□ 0.25
LDB3-208ENST00000623007 HSPA1BP0DMV9 641 aaKnown RBP16.64■□□□□ 0.25
LDB3-208ENST00000623007 DNAJB1P25685 340 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 CRHR1P34998 444 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 RFTN1Q14699 578 aaPredicted RBP16.64■□□□□ 0.25
LDB3-208ENST00000623007 FYB2Q5VWT5 728 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 RAP1GAP2Q684P5 730 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 PACS1Q6VY07 963 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 ZNF783Q6ZMS7 281 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 RTL10Q7L3V2 364 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 RASSF3Q86WH2 238 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 ZNF669Q96BR6 464 aaPredicted RBP16.64■□□□□ 0.25
LDB3-208ENST00000623007 YME1L1Q96TA2 773 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 VN1R3Q9BXE9 311 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 CCSER2Q9H7U1 834 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 KIF9Q9HAQ2 790 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 KLHL14Q9P2G3 628 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 GRID1Q9ULK0 1009 aa16.64■□□□□ 0.25
LDB3-208ENST00000623007 CXorf49A8MYA2 514 aaPredicted RBP16.63■□□□□ 0.25
LDB3-208ENST00000623007 PRRG1O14668 218 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 GLRA3O75311 464 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 PYGBP11216 843 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 HMGA1P17096 107 aaKnown RBP16.63■□□□□ 0.25
LDB3-208ENST00000623007 CORO7P57737 925 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 QPCTQ16769 361 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 TRMT10BQ6PF06 316 aaKnown RBP16.63■□□□□ 0.25
LDB3-208ENST00000623007 SPATA21Q7Z572 469 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 SETD3Q86TU7 594 aaPredicted RBP16.63■□□□□ 0.25
LDB3-208ENST00000623007 PEX13Q92968 403 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 IMP4Q96G21 291 aaKnown RBP16.63■□□□□ 0.25
LDB3-208ENST00000623007 PAWRQ96IZ0 340 aaKnown RBP16.63■□□□□ 0.25
LDB3-208ENST00000623007 RANBP9Q96S59 729 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 ELAC2Q9BQ52 826 aaKnown RBP16.63■□□□□ 0.25
LDB3-208ENST00000623007 TMEM106CQ9BVX2 250 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 RXFP1Q9HBX9 757 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 IL23AQ9NPF7 189 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 FGFR1OP2Q9NVK5 253 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 COL4A6Q14031 1691 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 SHROOM3Q8TF72 1996 aa16.63■□□□□ 0.25
LDB3-208ENST00000623007 TYW5A2RUC4 315 aaKnown RBP16.62■□□□□ 0.25
LDB3-208ENST00000623007 BIRC5O15392 142 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 TBX18O95935 607 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 OAS1P00973 400 aaKnown RBP16.62■□□□□ 0.25
LDB3-208ENST00000623007 EPOP01588 193 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 HLA-DQB2P05538 268 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 GSTA1P08263 222 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 ADRA1DP25100 572 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 ALDH3A1P30838 453 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 SERINC3Q13530 473 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 LRRC26Q2I0M4 334 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 ATG16L1Q676U5 607 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 PKN3Q6P5Z2 889 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 NETO2Q8NC67 525 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 DIS3LQ8TF46 1054 aaKnown RBP16.62■□□□□ 0.25
LDB3-208ENST00000623007 PSMG2Q969U7 264 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 ISL2Q96A47 359 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 SERAC1Q96JX3 654 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 SRPK1Q96SB4 655 aaKnown RBP16.62■□□□□ 0.25
LDB3-208ENST00000623007 NOL6Q9H6R4 1146 aaKnown RBP16.62■□□□□ 0.25
LDB3-208ENST00000623007 SMYD2Q9NRG4 433 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 ZNF212Q9UDV6 495 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 PRKAG3Q9UGI9 489 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 PLLPQ9Y342 182 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 NUP205Q92621 2012 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 HEATR9A2RTY3 570 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 ADAM12O43184 909 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 RFPL1O75677 317 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 PAPSS2O95340 614 aaPredicted RBP16.62■□□□□ 0.25
LDB3-208ENST00000623007 TROVE2P10155 538 aaKnown RBP eCLIP16.62■□□□□ 0.25
LDB3-208ENST00000623007 CSF2RAP15509 400 aa16.62■□□□□ 0.25
LDB3-208ENST00000623007 ADRA1AP35348 466 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms