RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 HMX3A6NHT5 357 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 C17orf100A8MU93 164 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 SYN3O14994 580 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 HNRNPRO43390 633 aaKnown RBP4.75□□□□□ -1.65
BRCA1-229ENST00000621897 TMCC1O94876 653 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 PRKAA2P54646 552 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 EGR4Q05215 589 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 CRYZQ08257 329 aaKnown RBP4.75□□□□□ -1.65
BRCA1-229ENST00000621897 HDAC1Q13547 482 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-229ENST00000621897 HNF4GQ14541 408 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 TUBB8Q3ZCM7 444 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 SYTL3Q4VX76 610 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 CCDC38Q502W7 563 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 OTUD1Q5VV17 481 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-229ENST00000621897 ZNF367Q7RTV3 350 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 RBM23Q86U06 439 aaKnown RBP4.75□□□□□ -1.65
BRCA1-229ENST00000621897 TRIM74Q86UV6 250 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 TRIM73Q86UV7 250 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 CAMK1DQ8IU85 385 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 SPICE1Q8N0Z3 855 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 CLEC18CQ8NCF0 446 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 SMRP1Q8NCR6 262 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 ELP5Q8TE02 316 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 NUDCD2Q8WVJ2 157 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 PLEKHA2Q9HB19 425 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 UPB1Q9UBR1 384 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 RAI2Q9Y5P3 530 aa4.75□□□□□ -1.65
BRCA1-229ENST00000621897 TCF20Q9UGU0 1960 aaKnown RBP4.74□□□□□ -1.65
BRCA1-229ENST00000621897 IPO5O00410 1097 aaKnown RBP4.74□□□□□ -1.65
BRCA1-229ENST00000621897 DDAH2O95865 285 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 HLA-DQA2P01906 255 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 CSF1P09603 554 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 HOXC6P09630 235 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 ARSAP15289 507 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 VEGFAP15692 232 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-229ENST00000621897 PRKCHP24723 683 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 HOXD3P31249 432 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-229ENST00000621897 AVPR1AP37288 418 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 ZP1P60852 638 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 TRIM14Q14142 442 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 ASIC2Q16515 512 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 TIGD6Q17RP2 521 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 ZNF284Q2VY69 593 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 JMJD6Q6NYC1 403 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-229ENST00000621897 PDXDC1Q6P996 788 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 GALNT7Q86SF2 657 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 CEP76Q8TAP6 659 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 BICD2Q8TD16 824 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 CSGALNACT1Q8TDX6 532 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 FAR1Q8WVX9 515 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 PHF21BQ96EK2 531 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 FRG2BQ96QU4 278 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 MEIS3Q99687 375 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 CATSPERBQ9H7T0 1116 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 SELENONQ9NZV5 590 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 SRP68Q9UHB9 627 aaKnown RBP4.74□□□□□ -1.65
BRCA1-229ENST00000621897 FZD10Q9ULW2 581 aa4.74□□□□□ -1.65
BRCA1-229ENST00000621897 MST1RQ04912 1400 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 CCDC194A0A1B0GVG4 234 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 E7EVH7 732 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 LDB2O43679 373 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 LIASO43766 372 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 KRT38O76015 456 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 CYP4B1P13584 511 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 THPOP40225 353 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 PDLIM4P50479 330 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 FOXO1Q12778 655 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 SMAD1Q15797 465 aaKnown RBP4.73□□□□□ -1.65
BRCA1-229ENST00000621897 DNTTIP2Q5QJE6 756 aaKnown RBP4.73□□□□□ -1.65
BRCA1-229ENST00000621897 CCDC174Q6PII3 467 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 MYLK4Q86YV6 388 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-229ENST00000621897 BRSK2Q8IWQ3 736 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 DCP1BQ8IZD4 617 aaKnown RBP4.73□□□□□ -1.65
BRCA1-229ENST00000621897 HDAC7Q8WUI4 952 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 MPHOSPH6Q99547 160 aaKnown RBP4.73□□□□□ -1.65
BRCA1-229ENST00000621897 CADM1Q9BY67 442 aaKnown RBP4.73□□□□□ -1.65
BRCA1-229ENST00000621897 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.73□□□□□ -1.65
BRCA1-229ENST00000621897 TAF1DQ9H5J8 278 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-229ENST00000621897 RMI1Q9H9A7 625 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 CD93Q9NPY3 652 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 G6PC2Q9NQR9 355 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 THAP1Q9NVV9 213 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 WNT16Q9UBV4 365 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 ICKQ9UPZ9 632 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 OSGIN2Q9Y236 505 aa4.73□□□□□ -1.65
BRCA1-229ENST00000621897 DOCK7Q96N67 2140 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 TARSL2A2RTX5 802 aaKnown RBP4.72□□□□□ -1.65
BRCA1-229ENST00000621897 DDTLA6NHG4 134 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-229ENST00000621897 PRSS44E7EML9 344 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 MS4A18H0YCH9 400 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 HSPB6O14558 160 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 PAPSS2O95340 614 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-229ENST00000621897 CLDN7O95471 211 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 TGFB3P10600 412 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 DSCR9P59020 149 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 CHAF1AQ13111 956 aaPredicted RBP4.72□□□□□ -1.65
BRCA1-229ENST00000621897 KEAP1Q14145 624 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 BRD3Q15059 726 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 HEPHL1Q6MZM0 1159 aa4.72□□□□□ -1.65
BRCA1-229ENST00000621897 C18orf65Q6ZTR6 163 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms