RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 MFSD3Q96ES6 412 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 TMEM176AQ96HP8 235 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 BTBD9Q96Q07 612 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 SLC39A3Q9BRY0 314 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 GATA5Q9BWX5 397 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 ARMC7Q9H6L4 198 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 GMPR2Q9P2T1 348 aaKnown RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 STK39Q9UEW8 545 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 C7orf72A4D263 438 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 C9JVG2 144 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 H3BRB1 525 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 PFDN6O15212 129 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 OGTO15294 1046 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ATG7O95352 703 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 PENKP01210 267 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 GOT1P17174 413 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 PSMB4P28070 264 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 CLCN3P51790 818 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 AP3M2P53677 418 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ADGRE1Q14246 886 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF460Q14592 562 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 KYAT1Q16773 422 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 SLC44A4Q53GD3 710 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF484Q5JVG2 852 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 KIAA1841Q6NSI8 718 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ANGPTL8Q6UXH0 198 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 CDKL3Q8IVW4 592 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF786Q8N393 782 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 MARVELD2Q8N4S9 558 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 SOCS4Q8WXH5 440 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 SLC29A1Q99808 456 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 TUT1Q9H6E5 874 aaKnown RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 CCDC167Q9P0B6 97 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 SORCS3Q9UPU3 1222 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 DMTF1Q9Y222 760 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 TBC1D30Q9Y2I9 924 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 CDY2AQ9Y6F7 541 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 CDY1Q9Y6F8 540 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 UBA6A0AVT1 1052 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 RGSL1A5PLK6 1076 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 SAC3D1A6NKF1 404 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 C2CD4BA6NLJ0 364 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 PLOD2O00469 737 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ME2P23368 584 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 GRK2P25098 689 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 NR1H2P55055 460 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ATP1A4Q13733 1029 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 LPIN1Q14693 890 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ARL13AQ5H913 290 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 FSTL4Q6MZW2 842 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 XKR5Q6UX68 686 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 DDIASQ8IXT1 998 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 BBS5Q8N3I7 341 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 C1orf127Q8N9H9 656 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 GIPC3Q8TF64 312 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 RPL10LQ96L21 214 aaKnown RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 CCDC28BQ9BUN5 200 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ILKAPQ9H0C8 392 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 CDH19Q9H159 772 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 PNPLA8Q9NP80 782 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 NMRK2Q9NPI5 230 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 C6orf203Q9P0P8 240 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 SFMBT1Q9UHJ3 866 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 STAP1Q9ULZ2 295 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 PCDHGC3Q9UN70 934 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 V9GYQ6 96 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ATP6AP2A0A1C7CYW4 349 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 PDLIM1O00151 329 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF195O14628 629 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ATP6AP2O75787 350 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 IL1BP01584 269 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 S100BP04271 92 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 HOXC6P09630 235 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 HNRNPLP14866 589 aaKnown RBP eCLIP7.07□□□□□ -1.281e-8■■■□□ 17.8
NEDD9-216ENST00000620854 TSHRP16473 764 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 TSPAN8P19075 237 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 UGT1A6P19224 532 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 TFEBP19484 476 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 PLK1P53350 603 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 PLOD1Q02809 727 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 CBX3Q13185 183 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 PTK2BQ14289 1009 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ATF7IP2Q5U623 682 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 C16orf87Q6PH81 154 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 GK5Q6ZS86 529 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 CYP4V2Q6ZWL3 525 aaPredicted RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 NUP93Q8N1F7 819 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 FAM47BQ8NA70 645 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 FAM110BQ8TC76 370 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 MRPS26Q9BYN8 205 aaKnown RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 MOCS1Q9NZB8 636 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 EBF1Q9UH73 591 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 RSL24D1Q9UHA3 163 aaKnown RBP7.07□□□□□ -1.28
NEDD9-216ENST00000620854 ORC6Q9Y5N6 252 aa7.07□□□□□ -1.28
NEDD9-216ENST00000620854 KCNU1A8MYU2 1149 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 AKAP10O43572 662 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 TRIM13O60858 407 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 TIPRLO75663 272 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 C2P06681 752 aa7.06□□□□□ -1.28
NEDD9-216ENST00000620854 L1CAMP32004 1257 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms