RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 FAM47BQ8NA70 645 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 VPS37AQ8NEZ2 397 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 DCPSQ96C86 337 aaKnown RBP10.55□□□□□ -0.72
VPS11-207ENST00000620429 MAP6Q96JE9 813 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 WDR11Q9BZH6 1224 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 MAGEE1Q9HCI5 957 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 TOPORSQ9NS56 1045 aaPredicted RBP10.55□□□□□ -0.72
VPS11-207ENST00000620429 KLHL11Q9NVR0 708 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 PCDH10Q9P2E7 1040 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 IPO11Q9UI26 975 aaKnown RBP10.55□□□□□ -0.72
VPS11-207ENST00000620429 MAU2Q9Y6X3 613 aa10.55□□□□□ -0.72
VPS11-207ENST00000620429 LRRIQ4A6NIV6 560 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 PLOD2O00469 737 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 HTRA2O43464 458 aaPredicted RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 B3GALNT1O75752 331 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 KITP10721 976 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 RRM2P31350 389 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 EPHX2P34913 555 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 PTGS2P35354 604 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 LEPRP48357 1165 aaKnown RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 RGS19P49795 217 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 ARSEP51690 589 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 MLLT6P55198 1093 aaPredicted RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 PRKCEQ02156 737 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 GPS1Q13098 491 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 HERC3Q15034 1050 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 NHSL2Q5HYW2 709 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 C16orf46Q6P387 395 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 TRMT1LQ7Z2T5 733 aaKnown RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 ARMC8Q8IUR7 673 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 TAS1R2Q8TE23 839 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 RAB2BQ8WUD1 216 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 CFAP36Q96G28 342 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 SERAC1Q96JX3 654 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 NOL6Q9H6R4 1146 aaKnown RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 POLR1BQ9H9Y6 1135 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 ATP13A2Q9NQ11 1180 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 MARCOQ9UEW3 520 aaPredicted RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 DNPEPQ9ULA0 475 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 LINC00854A0A1B0GVQ3 168 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 TRIM77I1YAP6 450 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 MTSS1O43312 755 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 AKAP10O43572 662 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 RNASEH2AO75792 299 aaKnown RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 DDNO94850 711 aaPredicted RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 SEC24DO94855 1032 aaPredicted RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 UNGP13051 313 aaPredicted RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 ALCAMQ13740 583 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 SNRNP35Q16560 246 aaKnown RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 CEP55Q53EZ4 464 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 ZCCHC8Q6NZY4 707 aaKnown RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 NEK5Q6P3R8 708 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 TTC33Q6PID6 262 aaPredicted RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 BEND7Q8N7W2 519 aaPredicted RBP10.54□□□□□ -0.72
VPS11-207ENST00000620429 OR13F1Q8NGS4 319 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 GRPEL2Q8TAA5 225 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 TFAP2CQ92754 450 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 SH2D3AQ9BRG2 576 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 TMEM121Q9BTD3 319 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 TEKT3Q9BXF9 490 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 SLC13A1Q9BZW2 595 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 RAD21L1Q9H4I0 556 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 ATP13A3Q9H7F0 1226 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 IFT122Q9HBG6 1241 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 MOCS1Q9NZB8 636 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 COL20A1Q9P218 1284 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 VANGL2Q9ULK5 521 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 FZD1Q9UP38 647 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 SHOC2Q9UQ13 582 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
VPS11-207ENST00000620429 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 PI4K2BG5E9Z4 385 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 hCG_2039718K7EN88 272 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 NFIBO00712 420 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 PMM2O15305 246 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 SLC16A4O15374 487 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 PSTPIP1O43586 416 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 BANF1O75531 89 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 PIAS1O75925 651 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 CPNE6O95741 557 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 COX4I1P13073 169 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 MYF6P23409 242 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 GRIK1P39086 918 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 NSFP46459 744 aaKnown RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 PTP4A2Q12974 167 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 CDK10Q15131 360 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 CHI3L2Q15782 390 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 DEFB115Q30KQ5 88 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.53□□□□□ -0.72
VPS11-207ENST00000620429 IQSEC1Q6DN90 963 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 KIAA0408Q6ZU52 694 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 ZBTB46Q86UZ6 589 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 CCDC60Q8IWA6 550 aaPredicted RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 CPXCR1Q8N123 301 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 AFAP1L2Q8N4X5 818 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 SNX31Q8N9S9 440 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 FBXL13Q8NEE6 735 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 NPLOC4Q8TAT6 608 aa10.53□□□□□ -0.72
VPS11-207ENST00000620429 ZC3H15Q8WU90 426 aaKnown RBP10.53□□□□□ -0.72
VPS11-207ENST00000620429 PDCD6IPQ8WUM4 868 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms