RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 WDR55Q9H6Y2 383 aaPredicted RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 VANGL2Q9ULK5 521 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 PTPRDP23468 1912 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 A0A0G2JLL6 359 aaPredicted RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 XPO1O14980 1071 aaKnown RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 TIMM44O43615 452 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 CABYRO75952 493 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 DESP17661 470 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 TFEBP19484 476 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 GABRB3P28472 473 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 ALDH3B2P48448 385 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 NUDT2P50583 147 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 C9orf57Q5W0N0 161 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 CASC4Q6P4E1 433 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 DHRS4L2Q6PKH6 230 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 EEPD1Q7L9B9 569 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 PRRT2Q7Z6L0 340 aaPredicted RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 FBXO16Q8IX29 292 aaPredicted RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 PDCD6IPQ8WUM4 868 aaKnown RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 KCTD13Q8WZ19 329 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 PGBD4Q96DM1 585 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 SLC9A7Q96T83 725 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 SERPINI1Q99574 410 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 KIFC1Q9BW19 673 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 ACE2Q9BYF1 805 aaPredicted RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 CIDEBQ9UHD4 219 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 RNF11Q9Y3C5 154 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 PCDHGA7Q9Y5G6 932 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 RBM47A0AV96 593 aaKnown RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 MAGEB16A2A368 324 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 C9IYK1 514 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 NOP56O00567 594 aaKnown RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 HSPA4LO95757 839 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 CLPTM1O96005 669 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 CYP2C9P11712 490 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 HOXD8P13378 290 aaPredicted RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 SERPINB5P36952 375 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 CCR10P46092 362 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 CYLC2Q14093 348 aaPredicted RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 VGLL4Q14135 290 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 KIZQ2M2Z5 673 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 DCAF4L1Q3SXM0 396 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 ARL13AQ5H913 290 aaPredicted RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 JDP2Q8WYK2 163 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 NTAN1Q96AB6 310 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 SLCO4A1Q96BD0 722 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 C16orf70Q9BSU1 422 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 WDR6Q9NNW5 1121 aaKnown RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 SETD4Q9NVD3 440 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 SUCOQ9UBS9 1254 aaKnown RBP13.31□□□□□ -0.28
SKP2-209ENST00000620197 NEU3Q9UQ49 428 aa13.31□□□□□ -0.28
SKP2-209ENST00000620197 SLCO1B7G3V0H7 640 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 COL6A2P12110 1019 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 SLC5A2P31639 672 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 ARL4AP40617 200 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 GRIA4P48058 902 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 INTS6LQ5JSJ4 861 aaKnown RBP13.3□□□□□ -0.28
SKP2-209ENST00000620197 SEL1L3Q68CR1 1132 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 NPWQ8N729 165 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 RCN3Q96D15 328 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 NMD3Q96D46 503 aaKnown RBP13.3□□□□□ -0.28
SKP2-209ENST00000620197 HDAC11Q96DB2 347 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 ASB9Q96DX5 294 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 PGAP3Q96FM1 320 aaPredicted RBP13.3□□□□□ -0.28
SKP2-209ENST00000620197 VPS39Q96JC1 886 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 CDRT15Q96T59 188 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 CEP41Q9BYV8 373 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 ADAMTS10Q9H324 1103 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 TXNRD2Q9NNW7 524 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 GNEQ9Y223 722 aaKnown RBP13.3□□□□□ -0.28
SKP2-209ENST00000620197 COPG1Q9Y678 874 aaKnown RBP13.3□□□□□ -0.28
SKP2-209ENST00000620197 FAM72CH0Y354 149 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 SPTLC1O15269 473 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 RNASEH2AO75792 299 aaKnown RBP13.3□□□□□ -0.28
SKP2-209ENST00000620197 TMCC1O94876 653 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 SLC25A27O95847 323 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 LGALS2P05162 132 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 PGK2P07205 417 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 LMO2P25791 158 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 POLD2P49005 469 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 PRKAA1Q13131 559 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 FAM72AQ5TYM5 149 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 FAM72DQ6L9T8 149 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 PAQR9Q6ZVX9 377 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 FAM72BQ86X60 149 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 MPP4Q96JB8 637 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 AGAP3Q96P47 875 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 PIGVQ9NUD9 493 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 CD300AQ9UGN4 299 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 IPO11Q9UI26 975 aaKnown RBP13.3□□□□□ -0.28
SKP2-209ENST00000620197 NLRC5Q86WI3 1866 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 F5H423 210 aaPredicted RBP13.3□□□□□ -0.28
SKP2-209ENST00000620197 TK2O00142 265 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 F7P08709 466 aaPredicted RBP13.3□□□□□ -0.28
SKP2-209ENST00000620197 CDK4P11802 303 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 CDH2P19022 906 aaPredicted RBP13.3□□□□□ -0.28
SKP2-209ENST00000620197 PCSK6P29122 969 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 GTF2A2P52657 109 aa13.3□□□□□ -0.28
SKP2-209ENST00000620197 GJA9P57773 515 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms